Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5034g00013 ATGGCTGAACAAGTACCATATGGAGTGGCCACAAGTCTCATCAACACGTTGGCTTCTGCAGCCTTCAGAGAGATTGCTTCCATTTATGGGGTCAAAAGGGACACTGAATGGCTCAAGAAAACTGTTGAACGCATCAAAGCTGTGTTGGCTGATGCTGACCAAAAGCAGCACACTGACCAACTCATCCAGCTCTGGATCAAGGACCTCAGGCAACTGCTTTACGATGCAGATGACTTGCTCGATGAGATCCACACTCAACATTTGCTGCGCAAGAGGGATGCAAAAGGAAAGGTACGTGACTTCTTCTCATCCTCCAACCCAATTGGTCTTCGCCTCCAAGTTGCTCACAATATTAGAAACATTAGAGAGCAATTTAATGATGTTGCTGAAAGTATGTCCAAGCTGAATTTAGTTGGAAGAGTTGTTGAAATGAAGCATGAAAAGAGTAACTGGAGGGAAACTAGTTCTTTTGTGCTCCAAGAGGATATGGTTGGTAGGGAGGGAGACAGGAAGCACATAATTGATTTGTTGTTGAATGATGATAATAGCCATCAAAATGTTTCTTTGGTTGCTATTGTCGGCATTGGGGGTTTGGGGAAAACCGCTCTTGCCCAACTGGTGTACAATGATGCTGACGTGGAGCGTTCTTTCCACAAGCGAATTTGGGTGTGTGTTTCCGAAGACTCTGATGTAAAGGCGATTGTGAAACAGACACTCGAATTACTACTTGGCGAAAAACAGGACGATCAACCATTAGAACTACTTCAAAATAAGCTTCAACGAAATTTAACGGGCCAAAATTTTTTGCTAGTTTTAGATGATATTTGGGATGATTTTCCCAGAAAGTGGGAAGAGTTGAAGAAGTTTTTGATGCGCGGTGCTGAGGGTAGTAAGATTTTGTTGACTACACGTGATCAAGCAGTAGTCAATAGAATGGGTGTAAAAACGCCGTATCTTTTGGAAGGATTGAACAGTGACCAATCTTGGACTCTGTTGAAAAGATTGGCATTTGACGATGATAAAAAAATAACCCCAAATCTGGAGTCTGTTGGCCAAAAAATTGCAGAAAAATGTATGGGCGTTCCGCTGGCAATAAGAGTTATGGGAGGTTTGTTGCGCTCAAAATTGCTAGAAAGTGACTGGGAAGATCTCTTGAAAGGTGACTTTTGGAAGCTAAGTGATAATAATGATTTAATCATGCCAATTTTAAAGTTGAGTTATGACGGTTTGGCAATTGAATTAAAACAGTGTTTTGCTTATTGTTCTTTGTATCCAAAAGATTGGAAATATGAAAAGGATGAATTGATTGATATGTGGATGGCACAAGGCTTCCTTAAAAATAAAGACGAGGAACAATGTTTAGAAGATGTGGGTGAAGAGTACGTTCGTATTTTGTTGATGAAGTCATTCTTGCAAGATGTTGAGATGGATGAATTAGGAGAAATAGAATATTTTAAAATGCATGATTTGATGCATGACTTGTCCCAATCATTTGCTACTAGCTTTGACATATACATTGAGGGAGGAAAAGACGTTCCAAGGTGTCCTAGACATGCTCTTTTTAAAACCTATGACACCAATAGTTCACTAAATGTGCCGGATCTGGGTAGATTGAGAAACTTTCGTGAAATGAAGAAAAATTATAGAAGGGATCCATCTGATTTATTTGTGTTAAAATGCTTACGGAGTCTAGATTTGTCAAACCAATCGATAAAATATTTTCCCAAATCAATAGGTAAAATAAGCCATTTGAGGCATCTTAATCTCGATTATTGTCATCAATTGACTTGTTTGCCCAAGAGTATAAGTAACTTGGTCAATTTGCAAACATTGAGATTGACCGGCTGTGAGAATTTGAAATTTCCTGGAGATATTATCACAAAGTTTGTAAAGTTGCGCCGGCTTGATATACTAGGTTGCAAGGCCTTTGTTGATGGAATGCCTATGGGGTTGGACAAAATGACTTGTATGCAGAGGTTGTCACATTTCATAGTGGGTAATGATGATAAGGAGAGAAAGAAAGCCAAATTGAACGAATTGAAAGATCTTAACCTCAGAGGTAGATTAGCCATTAAAAAACTGGATTCAGTAAGGGATGTAGAGGAGGAGTCTAAGTATGTTAATTTGAGAACAAAGAAAAACCTCATTTCCTTGACTTTGAATTGGGGAGAAGATCCAAAGATGGAAAAAAGTGATGCTATGCAGTTACTGGAAAATCTTCGCCCTCATCAAAATTTGAAGACACTAAAAATACAAGGGTACCCAGGGGTATGCCTATCTGATTGGCTTTTGTCATGTGCAAATCTTGTTCAATTGAAGTTTTCTGGAATCAACAATTGTCGATACTTGCCAGCGTTAGAAGGCTTGGTTTCTCTCAAGACTCTTCACATATCGGGGATGGATAAATTGGAGTGCATATATAAAGGATGTTCCTCATCAGCCAACTTCTTCCCATCTTTGGAGGAATTAGTAATTTACTCATGCGGAAGTTTAAGGGGATGGCAAAGGGAGGCAAATGTCCAAAATACAAGAGGTAATGAGTGTCATGATTCACTACCTTCATTTTCACGTCTTTCAGCATTAGGTATTCTTGATTGCCCAAACTTAAGATGCATGCCTACTTTTCCAAATCTCGTGAGGTATTTGTGCTTAGTCTACTCCAGCATGAAGCCATTGGTAGACACATTAAGTGTGAGCGCAATTGCGCCGTCAACATCACATGATATGACTCCATCTCTTTCCATGCTCAAGTCTCTTCACATTGAAGGGATAGACATAGAAGCATTACCAGAGGAATGGATGCAAAATCTCTCCTCTCTTAAACGTCTCTATATTGTGGGATTTTCAAGTCTAGAGAAACCATTTCTTCATATGCGAAATCTATCTGCTACACTCGAGGGATTGACTATTGCCAAACTTGGTGATGAGGATTATAACACCCACTTTACCCGAGTGGATTTGTGA 2964 0.3954 MAEQVPYGVATSLINTLASAAFREIASIYGVKRDTEWLKKTVERIKAVLADADQKQHTDQLIQLWIKDLRQLLYDADDLLDEIHTQHLLRKRDAKGKVRDFFSSSNPIGLRLQVAHNIRNIREQFNDVAESMSKLNLVGRVVEMKHEKSNWRETSSFVLQEDMVGREGDRKHIIDLLLNDDNSHQNVSLVAIVGIGGLGKTALAQLVYNDADVERSFHKRIWVCVSEDSDVKAIVKQTLELLLGEKQDDQPLELLQNKLQRNLTGQNFLLVLDDIWDDFPRKWEELKKFLMRGAEGSKILLTTRDQAVVNRMGVKTPYLLEGLNSDQSWTLLKRLAFDDDKKITPNLESVGQKIAEKCMGVPLAIRVMGGLLRSKLLESDWEDLLKGDFWKLSDNNDLIMPILKLSYDGLAIELKQCFAYCSLYPKDWKYEKDELIDMWMAQGFLKNKDEEQCLEDVGEEYVRILLMKSFLQDVEMDELGEIEYFKMHDLMHDLSQSFATSFDIYIEGGKDVPRCPRHALFKTYDTNSSLNVPDLGRLRNFREMKKNYRRDPSDLFVLKCLRSLDLSNQSIKYFPKSIGKISHLRHLNLDYCHQLTCLPKSISNLVNLQTLRLTGCENLKFPGDIITKFVKLRRLDILGCKAFVDGMPMGLDKMTCMQRLSHFIVGNDDKERKKAKLNELKDLNLRGRLAIKKLDSVRDVEEESKYVNLRTKKNLISLTLNWGEDPKMEKSDAMQLLENLRPHQNLKTLKIQGYPGVCLSDWLLSCANLVQLKFSGINNCRYLPALEGLVSLKTLHISGMDKLECIYKGCSSSANFFPSLEELVIYSCGSLRGWQREANVQNTRGNECHDSLPSFSRLSALGILDCPNLRCMPTFPNLVRYLCLVYSSMKPLVDTLSVSAIAPSTSHDMTPSLSMLKSLHIEGIDIEALPEEWMQNLSSLKRLYIVGFSSLEKPFLHMRNLSATLEGLTIAKLGDEDYNTHFTRVDL 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5034g00013 987 FunFam Probable disease resistance protein At1g63360 407 497 - -
Pral5034g00013 987 Pfam Rx N-terminal domain 11 95 IPR041118 -
Pral5034g00013 987 Gene3D - 145 316 IPR027417 -
Pral5034g00013 987 PRINTS Disease resistance protein signature 358 372 - -
Pral5034g00013 987 PRINTS Disease resistance protein signature 603 619 - -
Pral5034g00013 987 PRINTS Disease resistance protein signature 189 204 - -
Pral5034g00013 987 PRINTS Disease resistance protein signature 262 276 - -
Pral5034g00013 987 Gene3D - 10 119 - -
Pral5034g00013 987 Gene3D Ribonuclease Inhibitor 673 892 IPR032675 -
Pral5034g00013 987 Gene3D Ribonuclease Inhibitor 525 669 IPR032675 -
Pral5034g00013 987 SUPERFAMILY L domain-like 486 955 - -
Pral5034g00013 987 FunFam Probable disease resistance protein At1g61300 145 317 - -
Pral5034g00013 987 Pfam NB-ARC domain 171 408 IPR002182 GO:0043531
Pral5034g00013 987 PANTHER DISEASE RESISTANCE PROTEIN RP 39 831 IPR044974 GO:0006952
Pral5034g00013 987 Gene3D - 407 497 IPR036388 -
Pral5034g00013 987 Gene3D - 322 406 IPR042197 -
Pral5034g00013 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 421 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5034g00013 Pral-Chr5034 121607 124638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5034g00013 186 806 WRKY Transcription Factor Family AT5G45050 23.653 2.93e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5034g00013 - - pcin:129288884 1104.74