Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5034g00012 ATGGCGGAACAAGTACCATATGGAGTGGCTACAAGTCTCATCAACACGTTGGCTTCATTAGCCTTCAAAGAGATTGCTTCCATTTATGGGGTCGAGACTGAGATTGATTGGCTGGAGGAAACTGTTGGAGACATCAAAGCTGTGCTTGCTGATGCTGACCACAAGCACACTGAGCAAAGCATCCAGCGCTGGATAACCAAACTCAAACAAGTGCTTTACGAAGCAGATGACGTGCTTGATGAGATCCACACTAAACATTTGCTGCGCCAGAGGGATGGAAAGGGAAAGGTACGTGACTTCTTCTCATCCTCCAATCCAATCGCTTTTCGCTGCAAAATTGCTTGCGAGATTAGAAGGATTAAAGAGCAATTTAATGCTGTTACTAAAAGAATGTCGGAGTTGAATTTAGTTGGAAGAGTTGTTGAAATGAAGCATGAAAAGAGGAACCGGAGGGAAACTAGTTCTTTTGTGCTCCAAGAGCGTATGGTTGGCAGGGAGGGAAACAAGAAGCACATAATTGATTTGTTGTTGAATGATGATAATAGCCATCAAAATGTTTCCTTGGTTGCTATTGTCGGTATTGGGGGTTTGGGTAAAACTGCTCTTGCCCAGTTGGTGTACAACGATGCTGACGTGGACCGTTTCTTCCAAAAGCGAATGTGGGTGTGTGTTTCCGAAGACTCTGATGCAACGGCCCTTGTGAAACAGACACTCAAATCACTACCTGGCCAAAAACATGACGAGCAATCATTAGAACTACTTCAAAATGAGCTTCAAAAAAATTTAGCTGGCCAAAAATTTTTGCTAGTTTTAGATGATATTTGGGATGATTTTCCCAGAAAGTGGGAAGACTTAGAGAATATTTTGATGCGTGGTGCTAAGGGTAGTAAGATTTTGTTGACTACACGAGATCAAGCGGTAGTCAATAGAATGGGTGTAAAAACGCCATATCTTTTGGAAGGATTGAATAATGACCAATCTTGGACTCTGTTGAAAAGGTTGGCATTTGACGATGAGAAAATAATGACCCAAAATTTGGAGTCTATTGGCCAAAAAATTGCAGCAAAATGTAAGGGCGTTCCACTGGCAATAAGAGTGATGGGAAGTTTGTTGCGCTCAAAATTGCGGGAAAGTGACTGGGAAGATCTCTTGAAAGATGACTTTTGGAAGCTACGTGATGATAATGTTTCAATTATACCAATTTTAAAGTTGAGTTATGACAGTCTGGCAATTGAATTAAAACAGTGTTTTGCTTATTGTTCTATATATCCAAAAGATTGGAGATATAATAAGGATGAATTGATTGATATGTGGATGGCACAAGGCTTCCTTGAAAACAAAGACGAGGAACAATGTCTAGAAGACGTGGGTGAAGAGTACGTTCATGTTTTATTGATGAAGTCATTCTTGCAAGATGTTGAGAGGGATGAATCAGGAGAAATAGAATCTTTTAAAATGCATGATTTGATGCATGACTTGTCCCAATCAGTTGCTAGCTCTGACCTATACGTTGAGGGAGGAAAAAATGGTGCAATGTGTCCTATACATGCTTCTTTTGAAAAATATAACACCAATCGTTCACTAAATATGCCGGATCTAGGTAGATTGAGAACGTTTCATGAAATGAAGAAAGAAGATGGAAGGGATCTACCCGATTTATTTGTGTTCAAACGCTTACGAAGTCTAGATTTGTCAAACTCTATGATGAGATATTTGCCTAAATCGATAGGTAAAATGATCCATTTGAGGCATCTTAATCTCTCTTCTTGTAGCCAATTGACTTGTTTGCCGAAGAGTATAAGTAACTTAGTCAATTTGCAAACATTGATATTGAGCGACTGTTATAATTTGAAATTTCCTGGAGATATTATCACAAAGTTGGTAAAGTTGCGCCGGCTTGACATAGAAGATTGCAAGGCCTTTGATGATGGAATGCCTATGGGGTTGGGCAAAATGACTTGTATGCAGAGGTTGTCACATTTCATAGTGGGTAATGATGATAAGGAGATAAAGAAAGCCAAATTGAACGAATTGAAAGATCTTAACCTCAGAGGTAGATTAGCCATTAAGAAACTTGATTCAGTAAGGGATATAGAGGAGGAGTCCAAGAATGTTAATTTGAGAACAAAGAAAAACCTCATTTCCTTGTCCATGGATTGGGGAAACGACCCAAAGATGGAAAAAAGTGATGCCATGCAGTTACTGGAAAATCTTCGCCCTCATCAAAATTTGAGGATGCTAGAAATATATGGGTACCCGGGGGGACACCTGCCCGATTATTGGCTTTTGTCATGTACAAATCTTGTTCAACTACAGTTTTCTGGATTCAAAGATTGTCAATACTTGCCAGCATTAGAAGGCTTGGTTTCTCTCAAGACTCTTGACATATCGAGGATGGATAAATTGGAGTGCATATACTATAAAGGATGTTCCTCATCAGCCAACTTCTTCCCATCTTTGGAGGAATTAACAATTAGCCGGTGTGGAAGTTTAAGGGGATGGCAAAGGGAGGCAAATGGCCAAAATACAAGAGATAATGAGTGGCATGATTCACTGCCTCCATTTTTACGTCTTTTAGCATTGAGTATTTGGGGTTGCCCACACTTAAGATGCATGCCTGCTTTTCCAAATCTCGTGAGGGATTTGGATTTATTCAACTCTAGCATGAAGCCATTGGTAGACACATTAAGTGTGGGCACAATTGGGCCGTCAACATCACATGATATGACTCCATCTCTTTCCATGCTCAAGTCTCTTCACATTAGAGGGATAGAAATGGAAGCATTACCAGAGGAATGGATGCAAAATCTCTCCTCTCTTAAACATCTCTCCATTCGAGGATTTTCAAGTCTGGAGAAGCCATTTCTTCATATGCGGAATCTATCTGCTACACTCGAGGAATTGACTATTCAAGAACTTGGTGATGAGGATTATAGCATACAGTGCCAAGACCTTTGTTGCCTATGTTCTCTCCAAGCAATCACTTTTTCTTTTTGTGATCACCTCACAGCTTTACCCGAGTGGATTTGTGATCTCCAGTCACTGCGTAGTATGTGCATTTTCTATTGTAAAAACTTGGAGTTATTTCCAGCAGAAATGTCTCGCCTCACTACTTTACAAACACTAAGTGTCTACAGAGCTCCACTTCTAGAGGCCAAATGCAAGAGAGAAACAGGAGCAGAGTGGCTAAAAATTGCTCACATCCCAAATATATGGATCTAA 3222 0.4013 MAEQVPYGVATSLINTLASLAFKEIASIYGVETEIDWLEETVGDIKAVLADADHKHTEQSIQRWITKLKQVLYEADDVLDEIHTKHLLRQRDGKGKVRDFFSSSNPIAFRCKIACEIRRIKEQFNAVTKRMSELNLVGRVVEMKHEKRNRRETSSFVLQERMVGREGNKKHIIDLLLNDDNSHQNVSLVAIVGIGGLGKTALAQLVYNDADVDRFFQKRMWVCVSEDSDATALVKQTLKSLPGQKHDEQSLELLQNELQKNLAGQKFLLVLDDIWDDFPRKWEDLENILMRGAKGSKILLTTRDQAVVNRMGVKTPYLLEGLNNDQSWTLLKRLAFDDEKIMTQNLESIGQKIAAKCKGVPLAIRVMGSLLRSKLRESDWEDLLKDDFWKLRDDNVSIIPILKLSYDSLAIELKQCFAYCSIYPKDWRYNKDELIDMWMAQGFLENKDEEQCLEDVGEEYVHVLLMKSFLQDVERDESGEIESFKMHDLMHDLSQSVASSDLYVEGGKNGAMCPIHASFEKYNTNRSLNMPDLGRLRTFHEMKKEDGRDLPDLFVFKRLRSLDLSNSMMRYLPKSIGKMIHLRHLNLSSCSQLTCLPKSISNLVNLQTLILSDCYNLKFPGDIITKLVKLRRLDIEDCKAFDDGMPMGLGKMTCMQRLSHFIVGNDDKEIKKAKLNELKDLNLRGRLAIKKLDSVRDIEEESKNVNLRTKKNLISLSMDWGNDPKMEKSDAMQLLENLRPHQNLRMLEIYGYPGGHLPDYWLLSCTNLVQLQFSGFKDCQYLPALEGLVSLKTLDISRMDKLECIYYKGCSSSANFFPSLEELTISRCGSLRGWQREANGQNTRDNEWHDSLPPFLRLLALSIWGCPHLRCMPAFPNLVRDLDLFNSSMKPLVDTLSVGTIGPSTSHDMTPSLSMLKSLHIRGIEMEALPEEWMQNLSSLKHLSIRGFSSLEKPFLHMRNLSATLEELTIQELGDEDYSIQCQDLCCLCSLQAITFSFCDHLTALPEWICDLQSLRSMCIFYCKNLELFPAEMSRLTTLQTLSVYRAPLLEAKCKRETGAEWLKIAHIPNIWI 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5034g00012 1073 Gene3D Ribonuclease Inhibitor 896 1052 IPR032675 -
Pral5034g00012 1073 Gene3D - 143 316 IPR027417 -
Pral5034g00012 1073 PRINTS Disease resistance protein signature 357 371 - -
Pral5034g00012 1073 PRINTS Disease resistance protein signature 261 275 - -
Pral5034g00012 1073 PRINTS Disease resistance protein signature 188 203 - -
Pral5034g00012 1073 PRINTS Disease resistance protein signature 601 617 - -
Pral5034g00012 1073 SUPERFAMILY RNI-like 851 1051 - -
Pral5034g00012 1073 SUPERFAMILY L domain-like 485 877 - -
Pral5034g00012 1073 Pfam Rx N-terminal domain 11 94 IPR041118 -
Pral5034g00012 1073 PANTHER DISEASE RESISTANCE PROTEIN RP 59 866 IPR044974 GO:0006952
Pral5034g00012 1073 Gene3D Ribonuclease Inhibitor 668 891 IPR032675 -
Pral5034g00012 1073 Gene3D Ribonuclease Inhibitor 512 667 IPR032675 -
Pral5034g00012 1073 CDD RX-CC_like 7 123 IPR038005 -
Pral5034g00012 1073 Pfam NB-ARC domain 166 407 IPR002182 GO:0043531
Pral5034g00012 1073 Gene3D - 321 405 IPR042197 -
Pral5034g00012 1073 FunFam Probable disease resistance protein At1g61300 144 316 - -
Pral5034g00012 1073 FunFam Probable disease resistance protein At1g63360 406 496 - -
Pral5034g00012 1073 Gene3D - 406 497 IPR036388 -
Pral5034g00012 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 420 IPR027417 -
Pral5034g00012 1073 Gene3D - 10 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5034g00012 Pral-Chr5034 105814 109107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5034g00012 185 497 WRKY Transcription Factor Family AT5G45050 25.237 9.07e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5034g00012 - - pcin:129289506 1119.38