Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5034g00006 ATGTCGTCCATAAGCATCGGCGATGAGAGCCACCACCTCCAGCGTACGTTAGATTTTCGGGACCTGAAGGTCATCTCCGCCGTGGGCCGCGGAGCCAAGGGCGTTGTGTTTGCGGCCAAGAGGAATGACGATGCATTTGGTGAATATTTTGCTTTGAAAGTGATCTCCAAGGCCTTGATTCAGAAGAAAGCGAAGGCGATTGACAACAATGAGGGCGAGTGCAGGAGGGTGTCGTTTGAGCAGCAGGTGCTGCGTCGTTTTGATCATCCTCTCTTGCCTAGGTTGCGAGGGGTTCTGGAAACCGACAAGATCATTGGGTACGCCATCGATTACTGCCCCGGCGGCAATCTCCATTCTCTCCGGAAAAAGCAGACTGAGAAGATGTTTTCCGATGACAGCATAAGGTTTTATGCTGTGGAATTGGTCCTTGCATTGGAGTATCTGCACAATTTGGGCATAGTATACAGAGATTTGAAGCCAGAAAATATACTGATCCAAGAATCTGGTCACATAATGCTCGTCGACTTCGATCTTTCCAAAAAACTAATCCTGAAATCTCCAAAATCCCAGAGTAGCTCCTCGTCGCCGATTTCCCACTCGTCAAAGACGACGGCGATGAAGGACTTACGGAAGAAACGCTTCTTCCGGTTTTACAGTTGCTCCCTGCCAAGCCCCCCGTCGTACGAAACAGAAGCCTCACCGGATTTCCAATGTCCGCGACGGAGCGAGTCGGACTCGGTTGAGAAATCGAACTCGTTCGTTGGTACGGAGGAATACGTAGCTCCCGAAGTCATTTCGGGGAAGGGACATAACTTCGGAGTCGATTGGTGGTCGCTCGGCGTCGTTTTGTATGAGATGCTGTACGGAACGACGCCGTTTACGGGTCAGAACAGGAAAGAAACGTTTTATCGGATTTTGACGAAGGAACCGGAGTTAACCGGAGAGAAGACGCCGTTGAGGGACCTGATCGCGAAGCTGCTGGAGAAGGATCGTGACCGTCGGATCGACTTGGAAGGGATCAAGGGCCACGATTTCTTCAAAGGTGTTCAATGGGACTCCGTTTTGCAGGTGGCGCGGCCGCCGTATATTCCGTTGAATGAGGTTGGGGACACAAATGGGTTTAACCAAAAACAAGTGGAGGTATTTGTCCATGAGGTATTTTTTGGAACGGATGGTGAGGAAGAAAAAGGGAAAAAGAAAGAAGAAAATAGTAATTGTAATAATAATAATAATAGCAAGAACGTGTGGGTAGAGAAATTGAGTCAGAGTCACACCGAGAATGAGGATTTTTTAATTTTTTGA 1302 0.4862 MSSISIGDESHHLQRTLDFRDLKVISAVGRGAKGVVFAAKRNDDAFGEYFALKVISKALIQKKAKAIDNNEGECRRVSFEQQVLRRFDHPLLPRLRGVLETDKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDSIRFYAVELVLALEYLHNLGIVYRDLKPENILIQESGHIMLVDFDLSKKLILKSPKSQSSSSSPISHSSKTTAMKDLRKKRFFRFYSCSLPSPPSYETEASPDFQCPRRSESDSVEKSNSFVGTEEYVAPEVISGKGHNFGVDWWSLGVVLYEMLYGTTPFTGQNRKETFYRILTKEPELTGEKTPLRDLIAKLLEKDRDRRIDLEGIKGHDFFKGVQWDSVLQVARPPYIPLNEVGDTNGFNQKQVEVFVHEVFFGTDGEEEKGKKKEENSNCNNNNNSKNVWVEKLSQSHTENEDFLIF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5034g00006 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Pral5034g00006 433 ProSiteProfiles Protein kinase domain profile. 22 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5034g00006 433 Gene3D Phosphorylase Kinase; domain 1 21 115 - -
Pral5034g00006 433 SUPERFAMILY Protein kinase-like (PK-like) 21 375 IPR011009 -
Pral5034g00006 433 Pfam Protein kinase domain 247 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5034g00006 433 Pfam Protein kinase domain 24 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5034g00006 433 FunFam Serine/threonine-protein kinase OXI1 248 365 - -
Pral5034g00006 433 FunFam Serine/threonine-protein kinase OXI1 116 183 - -
Pral5034g00006 433 PANTHER FLIPPASE KINASE 1-RELATED 14 372 - -
Pral5034g00006 433 MobiDBLite consensus disorder prediction 393 412 - -
Pral5034g00006 433 SMART serkin_6 22 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5034g00006 433 MobiDBLite consensus disorder prediction 225 249 - -
Pral5034g00006 433 Gene3D Transferase(Phosphotransferase) domain 1 116 186 - -
Pral5034g00006 433 Gene3D Transferase(Phosphotransferase) domain 1 235 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5034g00006 Pral-Chr5034 62209 63863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5034g00006 7 433 AGC Kinase Gene Family AT3G25250 56.912 1.51e-155 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral5034g00006 Pkinase 5.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5034g00006 K20714 - qsa:O6P43_026737 499.204