Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5021g00002 ATGGCGAGCGAAGCAGTAGTTGAAAGTGCTGAAGCTGTGGCCGCGTCGACGGAGGCGGTGGCGCCGGAGACAGGTTCCAAGCATACACTGGATAGAAAGTGGACTTTTTGGTTCGATAATCAAACAAAGTCTAAGCAAGGTGCTGCTTGGGGAAACTCGCTTCGCAAGGTTTACACCTTTGACACCGTCGAGGAGTTCTGGTGTTTGTATGACCAGATATTTAAGCCCAGCAAACTGCCTGGCAATGCGGATTTCCACCTGTTCAAAACTGGAATTGAACCGAAATGGGAAGATCCTGAGTGCGCTAGTGGAGGAAAGTGGACTGCGGCCTGCAGCAGAAAGGCTATCTTGGATACCATGTGGCTTGAAACTTTAATGGCTTTGATTGGGGAGCAATTTGATGAGGGTGAGGACATATGTGGTGTGGTTGCCAGTGTGCGCCAGAGGCAGGACAAAATTTCATTATGGACAAAGACAGCAGCAAACGAGGCTGCGCAGATGAGCATTGGGAGGAAATGGAAGGAGATCATTGACGTCAATGATAAGATCCATTACAGCGCTCATGATGATTCGAAGAGGGATAGATCAGCAAAGAGTCGATACAGTGTGTGA 612 0.4886 MASEAVVESAEAVAASTEAVAPETGSKHTLDRKWTFWFDNQTKSKQGAAWGNSLRKVYTFDTVEEFWCLYDQIFKPSKLPGNADFHLFKTGIEPKWEDPECASGGKWTAACSRKAILDTMWLETLMALIGEQFDEGEDICGVVASVRQRQDKISLWTKTAANEAAQMSIGRKWKEIIDVNDKIHYSAHDDSKRDRSAKSRYSV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5021g00002 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 84 107 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Pral5021g00002 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 203 IPR023398 -
Pral5021g00002 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 16 194 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pral5021g00002 203 Pfam Eukaryotic initiation factor 4E 30 182 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pral5021g00002 203 SUPERFAMILY eIF4e-like 13 197 IPR023398 -
Pral5021g00002 203 FunFam Eukaryotic translation initiation factor 4E 19 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5021g00002 Pral-Chr5021 13151 15849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5021g00002 11 195 Eukaryotic Initiation Factors Gene Family AT5G35620 64.211 2.23e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5021g00002 K03259 - ini:109176333 331.257