Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5017g00005 ATGGCGAGCTCAGAAGAAGCGAAGCTCGAACGGTTCCTCCAGTGGCTACAGGGGAATGGAGTTCAACTTCATGGTTGCAGCATCAAGTATTGTGATTCCAGAAAAGGGTTTGGCATCTTTTCAACTAAAGATGTTTCCGATGGGGTTCTACTGGTTGTTCCGCTGGATTTAGCAATAACTCCAATGAGGGTATTGCAAGATCCTCTTCTCGGTCCCGAATGCAGGGCAATGTTTGAAGAAGGAGAAGTAGATGACAGGTTCTTGATGATTTTGTTCTTGACTATGGAGCGCTTGCGTCATAATTCTTCATGGAAGCCGTACCTTGACATGCTTCCAACTAGTTTCAGAAATCCACTTTGGTTTAGTGATGATGATCTTCAAGAGCTGAGGGGAACAACATTGTTCCGTGCTACTGAATTGCAGAAGAAAAACTTGCTGTCGTTGTATGATACCAAAGTCAAGGCTTTGGTGAAGAAGCTCCTGATTCTTGATGGATATTCAGAGACTGATGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTCTGGAGTCGTGCTTTGAATATCCCTTTTCCTCGTTCTTTTGTATTTCCGAAAATGCAAACACCTGACAGTTGCATTTCAGTCAATGGAAGTGTCAAGACTCTAATTAATGAAAGCCAGGTTGAAAAATCTGATGATGAAATCAATGAGATGGCCTGTAACAAAATACAGGGAGACCTAGTTTGGGTGGAGGGTCTTGTCCCGGGCATTGACTTTTGCAACCATGATCTGAAGCCAATAGCAACTTGGGAAATCGATGGAACTGGATCAGTCACGCATCTTCCTTCTTCCATGTACCTTCTCTCTGCTGCGCAAAATCCCTCAGAGATTGGTCAAGAAATTTCAATTAGCTATGGCAACAAAGGAAATGAGGAACTTCTCTATCTGTATGGTTTTGTGATCGATAATAACCCAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTGCTTCTATATCTTGCTCAGAATCCAAAAGTCGGCTTCTTGAAGCACAGAAGGCTGAGATGAGATGTCTTTTGCCCAAGACTTTGTTGGATCATGGGTTTTTTCCTTTAGGCACCAAAAAAGGTGGGGAAAATGAGAGGTGCAAGGTAGACCAAGTTTGCAATTATAGTTGGAGTGGTCAACGGAAGACACCATCTTATGCAAATAAGCTGGTCTTTCCCGAGAAGTTTATGACAGCCTTGAGGACCATTGCCATGCAGGAGAATGAGATCTTTAAAGTTTTCTCACTGCTTGAAGAGCTTCTTGGATCTGGAGAGGAAAGAGAACCATCGGATACGGATGTTCAATCAGCAGTCTGGGAGGTCTGTGGCGATTCTGGAGCCTTCCAATTGCTTGTTGATCTTCTTCGAGTTAAGTTAATGGATCTTGAAGAGGGTTCTGGAACGGAGGAAAGCGACACTGATTTGCTGAACAAGGCCCTCATTATTGATAGCCGGGATGATAACCAACAGTTGAAGAATAGTTCAAGCAACACCAATGAGACTGAGGAGCACAAGTCTATGAGTAGAAACCAATGGTCTTCTATAGTATATCGGCAAGGCCAAAAGCAACTCACTCGCTTATTCTTGAAAGAAGCAGAACACGCTCTGCAATTATCCTTAGATGTAGAAGAGAGATAG 1677 0.4311 MASSEEAKLERFLQWLQGNGVQLHGCSIKYCDSRKGFGIFSTKDVSDGVLLVVPLDLAITPMRVLQDPLLGPECRAMFEEGEVDDRFLMILFLTMERLRHNSSWKPYLDMLPTSFRNPLWFSDDDLQELRGTTLFRATELQKKNLLSLYDTKVKALVKKLLILDGYSETDVCFEDFLWANSVFWSRALNIPFPRSFVFPKMQTPDSCISVNGSVKTLINESQVEKSDDEINEMACNKIQGDLVWVEGLVPGIDFCNHDLKPIATWEIDGTGSVTHLPSSMYLLSAAQNPSEIGQEISISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPAEAIASISCSESKSRLLEAQKAEMRCLLPKTLLDHGFFPLGTKKGGENERCKVDQVCNYSWSGQRKTPSYANKLVFPEKFMTALRTIAMQENEIFKVFSLLEELLGSGEEREPSDTDVQSAVWEVCGDSGAFQLLVDLLRVKLMDLEEGSGTEESDTDLLNKALIIDSRDDNQQLKNSSSNTNETEEHKSMSRNQWSSIVYRQGQKQLTRLFLKEAEHALQLSLDVEER 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5017g00005 558 CDD SET_LSMT 32 315 - -
Pral5017g00005 558 SUPERFAMILY SET domain 8 319 IPR046341 -
Pral5017g00005 558 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 504 - -
Pral5017g00005 558 Pfam SET domain 36 301 IPR001214 GO:0005515
Pral5017g00005 558 Gene3D set domain protein methyltransferase, domain 1 5 315 - -
Pral5017g00005 558 MobiDBLite consensus disorder prediction 500 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5017g00005 Pral-Chr5017 21678 36254 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5017g00005 SET 9.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5017g00005 - - gmx:100777394 823.928