Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5016g00005 ATGCCGTCTCACGCGGATCTGGACCGTCAGATTGAGCAGCTGATGCAGTGCAAGCCTTTGTCGGAGGCGGAGGTGAAGACACTGTGCGATCAGGCGAGGGCGATACTGGTGGAGGAATGGAACGTGCAACCGGTGAAATGCCCTGTAACGGTGTGTGGGGATATTCACGGCCAGTTTTATGATCTCATCGAGTTGTTTCGGATAGGAGGTAGTGCTCCGGATACCAATTACCTCTTTATGGGCGACTATGTGGATCGTGGCTACTATTCTGTGGAGACTGTTACACTTTTGGTGGCCTTAAAAGTTCGCTACAGAGACAGAATCACAATTCTTAGGGGAAATCATGAGAGCCGTCAAATTACGCAAGTGTATGGCTTTTATGATGAATGCTTGAGAAAATATGGAAATGCCAATGTCTGGAAATACTTCACGGACTTATTTGATTATTGCCTCTGA 456 0.4737 MPSHADLDRQIEQLMQCKPLSEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYCL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5016g00005 151 Gene3D - 2 151 IPR029052 -
Pral5016g00005 151 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Pral5016g00005 151 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Pral5016g00005 151 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Pral5016g00005 151 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Pral5016g00005 151 SMART pp2a_7 20 151 IPR006186 GO:0016787
Pral5016g00005 151 SUPERFAMILY Metallo-dependent phosphatases 5 150 IPR029052 -
Pral5016g00005 151 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 149 IPR047129 GO:0004722
Pral5016g00005 151 Pfam Calcineurin-like phosphoesterase 48 148 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5016g00005 Pral-Chr5016 66764 69253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5016g00005 49 136 Calmodulin-binding Proteins AT5G63870 49.438 6.49e-22 87.4