Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5013g00013 ATGTTCACTCCCACTAATAATTACAGCAACTATTGCTTTCCTTTCTCTTCGTCTTCCTCCTCCTCCTCTTATTCCTTCCCTTTTCTTCATCATCATCCTTCAGCTTTCGAAAACAATGCTTCTTCTTCTTCTTCTACTTCTGCGAATGCCATCTTTTACCATCATGATCATAATCCTTCTCTGCCCTTCATACCCACTCTAATCCCAGAACAACTAACCAGTAATAATCTCGCTGCGCCCTCAGACTATGCTTGTGCGGTCGGGAAACAGCAGAACATTGCTCCCGATTGTAATGTCGTTCCTGCTAATTTCATCGCCAAGAAGCCTCCTTCCAAGAAGGATAGGCACAGCAAGATTTGCACATCTCAGGGCCTCAGAGACCGACGAGTGAGATTGTCCATTGAGATCGCTCGCAAGTTCTTCGATCTGCAAGACATGTTAGGGTTCGACAAAGCCAGCAACACTCTCGACTGGCTCTTCTCCAAGTCCAAGAAAGCCATTCAAGAGCTTGAAGTCGCAGCTCGAAGCAAGAAGAAAAGCAACAGTAACAGCAAAACCAACACCAACAAGAGCTTCTCTTCCTCCTCTGACTGCGAAGAAGTGGTATCACCACAGAGGGTGGATTCGGATTCCGGCAAGCCGAGGAGGTCAGATACGGAGAAGGCGAAGAAGGAGTCGAGGGAGAAGGCGAGGGCGAGGGCGAGGGAAAGGGCTAATCACAAAGGAAAGAGCTTAATGGTGGTTTGTGGTACTGATACCAGTGAAGGAACAAGAAGAGAAGAGCCTAATATGGAAATTGAAGGGTGTACTGTGATCAAAAGGAAGATAAAGCAGCCTTCTAATCTGATGAATTCGAATCATCCCCAAAACCACCTTGTGATCCCTAATCACAAGGAAGCAGGTTTCACCAACAACAACTCTCTCATTAATGCTGCTACTACTAGCCATGACTACTCCATATTCCCTAATCTGACTCCGAATTGGGACACTAATGGGCGCCCCAATTTCTGTGCTATAGCCAATATGAATATGTCCACAGATCTTCAAATTTATGGGAAGTCTTGGGAAGAGTGCAACAATCAGCGTCAACAATAG 1095 0.4594 MFTPTNNYSNYCFPFSSSSSSSSYSFPFLHHHPSAFENNASSSSSTSANAIFYHHDHNPSLPFIPTLIPEQLTSNNLAAPSDYACAVGKQQNIAPDCNVVPANFIAKKPPSKKDRHSKICTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFSKSKKAIQELEVAARSKKKSNSNSKTNTNKSFSSSSDCEEVVSPQRVDSDSGKPRRSDTEKAKKESREKARARARERANHKGKSLMVVCGTDTSEGTRREEPNMEIEGCTVIKRKIKQPSNLMNSNHPQNHLVIPNHKEAGFTNNNSLINAATTSHDYSIFPNLTPNWDTNGRPNFCAIANMNMSTDLQIYGKSWEECNNQRQQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5013g00013 364 Pfam TCP family transcription factor 111 242 IPR017887 -
Pral5013g00013 364 ProSiteProfiles TCP domain profile. 112 170 IPR017887 -
Pral5013g00013 364 MobiDBLite consensus disorder prediction 179 202 - -
Pral5013g00013 364 ProSiteProfiles R domain profile. 224 241 IPR017888 -
Pral5013g00013 364 MobiDBLite consensus disorder prediction 203 242 - -
Pral5013g00013 364 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 38 286 IPR005333 GO:0003700
Pral5013g00013 364 MobiDBLite consensus disorder prediction 173 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5013g00013 Pral-Chr5013 331297 333279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5013g00013 108 170 TCP Transcription Factor Family AT1G67260 77.778 6.82e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral5013g00013 TCP 2.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5013g00013 - - pcin:129292712 495.352