Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5013g00009 ATGAGTTTGGAGCTGCAGAGAAATGGTTACTTCTTATTGATCAACTGCTACCCTGTACTTATAAATCTGTTACTAGAAGGAAGATGGTCTAAGGTCAAGACACCTGAGAATGGTAGATGCTGTTTAGTTGGTTTTACTGGTTCTGCTATTCTCAGTTCCACAAGTCTTCCTTATGAGGCACAGCAGAAGGTACACAGCATTACAACGATTGTGGAAAGAGAACTGTTTAATCATGCTGCTTCAGAGGATGAGTATAAGAATCAGGAGACCTTGGCCCAACGAATGCAGAACCAACTCCAAGGGACAATATTCAGTCCGCAAGTAAACAGTTACAATACTTCCACACCTATGAAGGGTCCCTCTTCTGAGTTATCACATGCTTGGTATAACAGAAATCAAGCAGACCCAGTTTTGCAGATGCTTGCTGCTAGTGACATAAATTTCACTGATTTTAGCAAGGCCAATGTGGACAATACTAATAAATATGAATTTTCCAATGGGAGGCAGTCTCATGCTTCTGTTGGCAATGAGAGAACTTTTCCTTATAATGACTTTTCATCATTTCTGAGATCCGTTGATCCAGATGGGTTTTCTAACTCTAATGCTCCTGGTGGAACAAGCAGTCTCAATTCGAGCTTCAAATCTATTTTCTCCCATTTACAGCATCAACAGAGAGATCATGTGGAGAAGGATTGGAGCAAGTACGATGGAAATCAATCTTCACCTTTTGTCATTACAATGAGAGAATCCCCACTGTCTATGCATGGAAATTTAATGATCTCTCCATTTGTGAGAACGGAAGCTTCTCAAGCTTTCAGTAATTTTACCGTCCAGAACCCTTGCTGTCAGTATTCAAGCGTCAATAACTTAATGCAGTATCAGCCCCAGAATTTGCATAGTCAACAAAACTTCCAACATTTTGAGTCGTCATATGAGCAGGGTGCTAATGCATATATTGCCAAGTCAAGACCCTGCTTTGCAAGTAAACATGAACCTTGCAGCCAACTGCAGGGGCAGAAAATACTGAATCAATCTCAGCTTCCTTCAACACCTATGAATGTAGGTCAACAATTTTTTTCAGCAAGTTCAGCATGCCTTTATGGTTCTAATAGAGCTGCAGGGGTAGCTCTAAGACATTTTGATGAATGTAGAAGTGATGATTATCGTAGTTCAGACTCTTCAAACATCATGACGATGGATTCCACTGTGAGAGGTCATGACAACTTGGAAGGCATTTCACCACCTTCCAAAAGATTGAAAATAGAAGCTACTTTTGATGTTTCCGTGAGCAATAGTGATATTTATAAACTATGGGATTCTCAGATGGTTCTAAACAATTCTCCTGAAAGGCTTCCAAAAATGCCGCAACAACCAGAATCTTTCTTTCCTATCTATTCCAAAGTTACGGACAACAATATGGAATCATCCACGAATGCAAAACAAGATTCTGCAAATTTTAGCATGACAGACAACAATGTGATTGGCATAGAAGCTATTCTTTTTGAATCAAGAGAAGCTAGTCATAAATTACGGGATTCATATCCCAAAAGCAATGATGAGGTAGCCAGAAACATTGGGGAAAATGATAGTGGATCAAATTCAAATTCAAGTAAACATACTTTCAAGAAAGATCCTAGTGTTGATATAGGCGGTGTACAGGAAAGAGGTGGCTTTGACCAGGCTGGGAAGAAAACTACAAAAGAAGTTATTGGGCCAAAAGCTGATCTGGAAAAGGCAATGGAGTTTTCAAATCAAAAAATAATGACTGTTTCAGGTGGTGTATTTGGACAAAACTTTGATAATGAGACTCTTTCTCAAGGTCCAGAAGTTGATGGTGTATTGGAGAAGTCATACCTTGAAAGCAATGGTCTGATAGCCAGAAGCTCAATGGATACTGTTAGAGGATCAAGTCTCAGTGTCCAAGCTTTCCAAAAAGATTCTTGTGCTGATATGGAGGGTGTACAGGGAAGAGTTGGGTTTGACCAGGCTGGGAAGAAAACTACAGAAGAAGTTATTGAGCCAAAAGCTCATTTAGAGCAGGGAACAGTGTCTTCAAAGGCAAATCCAGTAATAAGTGGTGTTTCCTATGATGTACTTGAAAAAACTTACAAGAGTGGGACTACCTCTGAAGGCATAGAAGGTGGTAACACATTGGAGGACTCATACCTCAACATTGATGATGTGAAGTTGACAGTCAGTAATGCACCAAGTGATGTTGGCAAGTCAAATTCAAGTGAGCGCACTCTCCAGAAAGATCCTATTGCCGATGTAGATGATTTTTGGTGCCAAAATGAGTTCAACCAGTCTGTTAAAAACAATGCAAATGGAATTACTGAGCCAAAATATGATTTGGAGAATGGAGAAAAGTCTTCAAAACCAACTTTAAGCAGTGTTTCCTTGACTGAAACTTTCACATATGATCAAATAAAGGAACACATTATGAGTCTAAGGCAGGGTTTTGGTCAGAGTATACTTGAGGAAGAAATTGGAATTGATGATAACTCATGCGCGTTGTGTGGAATGGAGAAGCTTTTCTTTGCTCCAGTGCCAATCTATTGCCTATCTTGTGGCAAACTCATCAAAAGAAACGCAAACTTTTACCAGAGAAGAGCAGAAGAGATTGATACAGAACAGTGCTTTTGCACCCCTTGTTTCAGAAATTCTCGAGGTGAATCTATCCAATTCAATGGGGTATCTATTCCCAAGAAAGTACTTGATTGTAAGAAAAACGATTATGTTACTGAAGAAGCGTGGGTCCAATGTGACAAATGTCAGAGGTGGCAACATCAGATATGTGCTCTCTTCAACGATAAGAGAAATTCAGAAGGCAAATTTCAGTATGTGTGTCCCAAATGCTGCTCAAAAGAAATTGAAGAAGGAATTCGTACACCCTTAGGGACTGCTATTTTTGGTGCTAAGGACTTGCCAAGGACCAAGCTTAGTGATCATGTAGAGCAAAGACTCTTTTTGTGTCTTGAACATGAGAGAGCGCACAAGGCAAAAGTTGAAGGAAAGAATATTGAAGAGATTTCTGGAGCGGAAAATCTTACTGTAAGGGTGGTGCTATCAGTTGAAAAGCAATTAAAAGTGAAAAAGGAGTTTCTTGACGTCCTGTCTGAGGAGAGTTACTCTCCAGAGTTCCCATATACATCGAAAGTTATTCTTTTGTTCCAGAATATAGAGGGAGTAGATGTGTGTATCTACGTTGTTTTTGTCCAGGAGTTTGGCTCAGAATGTAGTCACCCAAATCATCGTTGTGTGTACATCTCATATATTGATTCAGTCAAGCATTTTAGGCCTCAAAGAGAGACTGTGACTGGAGAAGCTCTTCGTACATTTGTGTATCATGAAATATTGATTGGATATCTTGAATTTTGCAAAAAACGAGGTTTTGAAAAATGTTACATTTGGGCTTGTCCTCCTTTAAAAGGGGAAGATTATGTGCTATATTGCCATCCTCAGAGCCAGAAAACTCCAAAGAGTGATAAACTAAGACGCTGGTATCATTCAATGTTAAGAAAGGCCACTAAAGAAGACATTGTAGTTGGTTTGACCAATATCTATGATCAATTCTTTGTTTCTGCTGAAAAATGCAACTCCAAGGTGACAGCTGCTCGTTTGCCATACTTTGATGGAGACTACTGGTCTGGTGCTGTTATGAATGAAATCAAGAAAATTGAACAGGAGAGTAAAGGAGAGTATGACAAAAAGTTGAAACAAGTATTGACCAAAAGAGCTCTAAAGTCAATGGGACATACAGACCCTTCAAAAGACACCGCCAAAGACATTCTGGTGATGCATAAATTGGGCCAAACTATATTACCCGTCAAGGAAGATTTCATCATAGTCCAATTGCAGTATACTTGCACGCTTTGTCATAAGGCCATATTGTCTGGAAAGCGATGGTTTTGCGCTGAGTGTAGGAAATACCAGCAGTGTGAAAGATGCCGCACTTCTGACACACATACTTCAATTAATGGGGAGAAGCATACTCTCTGCCAGGCTGTCGTGGATGACATCCCTTGTGATACTAAGGAGAATGATATCGCACTGGACAATGATTTATTTGAGAATAGGATTAACTTTTTGAGTTTCTGCCAACAGAATCAACTTCAGTTTGACACACTCCGTCATGCCAAGCATTCCTCAATGATACTTCTCTATCACCTCAAGAGTTCTGCTTTGCGTAATGTTGATTCCAGATGCAGCATTTGCCGTAAAGATAATGTGTCTCAGCTAAGCTGGAAATGTGATATTTGTCCCCAGTTGTCCGTATGCTCAACATGCTATGAGGAAAAAGGGGCAGCTTGCCATCAGCACAAGTTAAGACAATATCCTTCCACAGCTCACTGTCTGCCAGAGAATCAGCGGTTAGAGCAGAGAAATGGCCGGGAACTTCTGAAAGTTCTAAGGCACACATCTCAATGTAACTCAACAATAAGTCAACCATGCTCTTACCCAAACTGTCTTCAGATTAAAAAGTTGTTTTCCCATGCCAATAAGTGCACTGTTAAGGCACGTGGGGGTTGCCAACATTGTAAGAAGGCATGGACGGTGTTGAGTCTTCACTCAAAGAATTGCAAGGACTCAATGTGCCGCATCGAGCGATGCAATGACATGAAGAAATATGCAGAATGGTTAGCACAGCAACGAAAATCTCGGCGTCAAGATGCAGTTTTAGGATCATCAGCGAGAGAATAG 4701 0.4023 MSLELQRNGYFLLINCYPVLINLLLEGRWSKVKTPENGRCCLVGFTGSAILSSTSLPYEAQQKVHSITTIVERELFNHAASEDEYKNQETLAQRMQNQLQGTIFSPQVNSYNTSTPMKGPSSELSHAWYNRNQADPVLQMLAASDINFTDFSKANVDNTNKYEFSNGRQSHASVGNERTFPYNDFSSFLRSVDPDGFSNSNAPGGTSSLNSSFKSIFSHLQHQQRDHVEKDWSKYDGNQSSPFVITMRESPLSMHGNLMISPFVRTEASQAFSNFTVQNPCCQYSSVNNLMQYQPQNLHSQQNFQHFESSYEQGANAYIAKSRPCFASKHEPCSQLQGQKILNQSQLPSTPMNVGQQFFSASSACLYGSNRAAGVALRHFDECRSDDYRSSDSSNIMTMDSTVRGHDNLEGISPPSKRLKIEATFDVSVSNSDIYKLWDSQMVLNNSPERLPKMPQQPESFFPIYSKVTDNNMESSTNAKQDSANFSMTDNNVIGIEAILFESREASHKLRDSYPKSNDEVARNIGENDSGSNSNSSKHTFKKDPSVDIGGVQERGGFDQAGKKTTKEVIGPKADLEKAMEFSNQKIMTVSGGVFGQNFDNETLSQGPEVDGVLEKSYLESNGLIARSSMDTVRGSSLSVQAFQKDSCADMEGVQGRVGFDQAGKKTTEEVIEPKAHLEQGTVSSKANPVISGVSYDVLEKTYKSGTTSEGIEGGNTLEDSYLNIDDVKLTVSNAPSDVGKSNSSERTLQKDPIADVDDFWCQNEFNQSVKNNANGITEPKYDLENGEKSSKPTLSSVSLTETFTYDQIKEHIMSLRQGFGQSILEEEIGIDDNSCALCGMEKLFFAPVPIYCLSCGKLIKRNANFYQRRAEEIDTEQCFCTPCFRNSRGESIQFNGVSIPKKVLDCKKNDYVTEEAWVQCDKCQRWQHQICALFNDKRNSEGKFQYVCPKCCSKEIEEGIRTPLGTAIFGAKDLPRTKLSDHVEQRLFLCLEHERAHKAKVEGKNIEEISGAENLTVRVVLSVEKQLKVKKEFLDVLSEESYSPEFPYTSKVILLFQNIEGVDVCIYVVFVQEFGSECSHPNHRCVYISYIDSVKHFRPQRETVTGEALRTFVYHEILIGYLEFCKKRGFEKCYIWACPPLKGEDYVLYCHPQSQKTPKSDKLRRWYHSMLRKATKEDIVVGLTNIYDQFFVSAEKCNSKVTAARLPYFDGDYWSGAVMNEIKKIEQESKGEYDKKLKQVLTKRALKSMGHTDPSKDTAKDILVMHKLGQTILPVKEDFIIVQLQYTCTLCHKAILSGKRWFCAECRKYQQCERCRTSDTHTSINGEKHTLCQAVVDDIPCDTKENDIALDNDLFENRINFLSFCQQNQLQFDTLRHAKHSSMILLYHLKSSALRNVDSRCSICRKDNVSQLSWKCDICPQLSVCSTCYEEKGAACHQHKLRQYPSTAHCLPENQRLEQRNGRELLKVLRHTSQCNSTISQPCSYPNCLQIKKLFSHANKCTVKARGGCQHCKKAWTVLSLHSKNCKDSMCRIERCNDMKKYAEWLAQQRKSRRQDAVLGSSARE 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5013g00009 1566 ProSiteProfiles Zinc finger PHD-type profile. 878 955 IPR019787 -
Pral5013g00009 1566 SUPERFAMILY RING/U-box 1264 1326 - -
Pral5013g00009 1566 SMART PHD_3 907 953 IPR001965 -
Pral5013g00009 1566 MobiDBLite consensus disorder prediction 773 794 - -
Pral5013g00009 1566 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 969 1395 IPR031162 GO:0004402
Pral5013g00009 1566 MobiDBLite consensus disorder prediction 524 540 - -
Pral5013g00009 1566 SUPERFAMILY TAZ domain 1461 1540 IPR035898 -
Pral5013g00009 1566 CDD PHD_HAC_like 880 952 - -
Pral5013g00009 1566 SMART zz_5 1396 1442 IPR000433 GO:0008270
Pral5013g00009 1566 SMART zz_5 1283 1328 IPR000433 GO:0008270
Pral5013g00009 1566 SUPERFAMILY FYVE/PHD zinc finger 907 955 IPR011011 -
Pral5013g00009 1566 Pfam TAZ zinc finger 1465 1537 IPR000197 -
Pral5013g00009 1566 SUPERFAMILY RING/U-box 1380 1445 - -
Pral5013g00009 1566 MobiDBLite consensus disorder prediction 511 570 - -
Pral5013g00009 1566 Pfam Histone acetylation protein 1010 1220 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral5013g00009 1566 SMART TAZ_2 1457 1538 IPR000197 -
Pral5013g00009 1566 Coils Coil 78 98 - -
Pral5013g00009 1566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 905 953 IPR013083 -
Pral5013g00009 1566 SMART KAT11_2 1002 1296 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral5013g00009 1566 PANTHER CBP/P300-RELATED 66 1560 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral5013g00009 1566 Gene3D TAZ domain 1453 1563 IPR035898 -
Pral5013g00009 1566 Gene3D - 1393 1446 IPR043145 -
Pral5013g00009 1566 Gene3D - 1283 1332 IPR043145 -
Pral5013g00009 1566 ProSiteProfiles Zinc finger TAZ-type profile. 1452 1540 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5013g00009 Pral-Chr5013 275408 284291 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral5013g00009 HAT_KAT11 2.4e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5013g00009 K04498 - pcin:129293164 1445.25