Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5010g00011 ATGGCAAGGGTAAGAGATAGAACAGAGGATTTCAAAGATGCTGTACGACAGAGTGCTCGCTCTTTGGGGTATGATGAGGCCAAATTGGCATCAGTCATGGCTTCTTTTATCATTCACAAACCTCGGCAAAGGTCACCATTTACTAAAGCGGCACTGAAGACGCTTGAGAGTATTGGAGAATTGGACCAGTTCTTGTTGAAGCACAGAAAGGATTATACAGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATAGAACATGAAGTCAGTACTTTTATTAAAACTTGCCAACAGCAAATTGATGTTCTAAAAAACAGTATTAATGATGAAGAGGCGAACTCAAAAGGCTGGCTTGGCATTGCAGCTGCGAAGTCTAATGTGGACACTATAGCCCACAAACACGGGGTGGTTCTAATTCTGAGTGAGAGACTCCATTCCGTAACTGCTCAGTTTGATCAGCTCAGAGCTGTGCGCTTCCAGGATGCTATTAATAGAGCTATACCACGAAGAAAACTTAACCGTATGACCAAAAAGGATTCTGCAGAAGCTTCAAACTCAGGCAGTATGGAGCTCAGAGAACCTGATGAATCACGCAATGAACCTCTAAGAGTCCAACAGCAACTCTTGGATGATGAAACACGTGCTCTTCAGGTGGAATTGACTAGTCTTCTAGATGCAGTTCAAGAGACTGAAACAAAGATGGTGGAAATGTCTGCACTGAATCACTTATTATCGACCCATGTTCTGCAACAAGCTCAGCAAATTGAGCTCCTATATGACCAGGCTGTTGAAGCCACCAAGAATGTGGAGCTTGGTAACAAAGAACTGTCCCAGGCCATTCAGCGGAATAGCAGCAGCAGAACATTTCTTTTGTTGTTTCTTTTTGTACTTACTTTTTCTGTCCTCTTTCTTGATTGGTACAGCTGA 930 0.4323 MARVRDRTEDFKDAVRQSARSLGYDEAKLASVMASFIIHKPRQRSPFTKAALKTLESIGELDQFLLKHRKDYTDLHRTTEQERDSIEHEVSTFIKTCQQQIDVLKNSINDEEANSKGWLGIAAAKSNVDTIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINRAIPRRKLNRMTKKDSAEASNSGSMELREPDESRNEPLRVQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLLSTHVLQQAQQIELLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSVLFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5010g00011 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020|GO:0016192
Pral5010g00011 309 Gene3D - 212 306 - -
Pral5010g00011 309 FunFam Syntaxin-81 like 212 306 - -
Pral5010g00011 309 Coils Coil 94 114 - -
Pral5010g00011 309 PANTHER SYNTAXIN-18 1 309 - -
Pral5010g00011 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Pral5010g00011 309 MobiDBLite consensus disorder prediction 171 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5010g00011 Pral-Chr5010 59461 63262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5010g00011 65 309 SNARE and Associated Proteins AT1G51740 75.203 3.38e-117 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5010g00011 K08492 - gmx:100778011 528.865