Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5008g00024 ATGGATGACACTCTAAAGAACCTCCTTCATAGCTGTTTTGTACCCAGAGGGATAGGTGGTCTTGATAAACTTGGTAAATTAGACTTATCCAGTAATTACTTCAAAGGACCTATTCCTTCCAACATATTCAACATTTCAACATTAACATTTTTAAACCTTGGCAGCAACTCCCTCTCTGGCGTTCTCCCATCACATTTAGGAAATGGCCTTCCCAATTTGGAGAAGTTAGGGTTGGATGGGAATGAACTAACTGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTGTGTTACACTTGTCATTGAATAAACTTACCAAAGCTATACCCAATGTAATTGGAAATTTAACAAGCTTGATTGACTTAGCTTTGGATGGGAATGAATTGACTGGTTTGATTCCATATACATTTGATAAATTACGGAGCCTTCAACGTTTAAGCCTGAGCAACAACAAATTACAAGGTTCCATTATAAATAACTTTTGCCAACTCAAAAGTCTAAGTGAGTTGAATCTTGCCAACAACATGTTTTTGGGAGCAATTTCGGGATGTCTTGGGAATACTTCTTTGCAAAAGTTGAATTTTAGCTCTAACAAATTTGTTTCTCATATACCCTCTTCTCTTTGGAGTCTCAAAGATTTATTGGTTTTAGATATATCCTCCAATGCATTGAGTGGAATAATTTCAGCAGAGGTATCAAACTTGAGAGCAATTATACTATTGGATTTGTCAAGAAACCAAATTTCAGGAAGCATCCCTACAACAATGGGTGGGTTGCAGACTTTGCAAAACTTATCTTTGGCTCACAACAAATTACAAGGGCCTATACTTGAATCACTAAGTGACATGGTCAGTATTGAGTCAATAGATCTTTCTCATAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCACTGCACTATCTTAAATCTATTAATCTTTCCTACAATTTATTGGATGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATCTCACTGCTCAATCTTTTATGATGAATAAAGGTCTTTGCGGGAAATCCCACCTACACGTCCAACCATGTAGGAAAGGAAACAAGCCCATAACAAATAAAGTGATGTTGGCGATAAAATGCTTAGTGCCTATCATGGTTGTCATTTTGCTTGTTACAGGCATTGTCTTTCTAAAGCATAATAGAGACGACGCTAACTATGCAACCAATAGGGATTTAACAAATTTGGATGCACCAACTAGGATATCTTATTATGAGCTTTTACAGGGAACAAATGGATTTGATGAGAGGAATCTTCTTGGCTTTGGAAGTTTTGGATCAGTGTACAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTGTTTAACATAGACATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGTGTTGCTATGCGTAATTTTCGCCATCGTAATCTCATTAAGATCATTAGTAGTTGCTCAAATGATGATTTCAAGTCTCTAATCATGGAATTCATGTCAAATGGAAGTCTTGATAGATGGTTGTACTATCATAACTATTGTTTAGATATCTTGCAGAGATTGAATATAATGGTTGATGTGGCTGCTGCATTAGAGTATCTTCATCATGGTACTTCTACTCCGATTGTTCATTGTGACATAAAACCAAGCAATATTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATAGCTAAACTATTAGATGAAGGACAGTTGGAAACTCATACAAAAACATTGGCTACAGTTGGCTATATGGCACCAGAGTATGGCTCAAAAGGAGTAGTTTCTTTCAAAGCAGATGTGTATGGCTATGGTATCATGCTAATGGAGATGTTTACAAGGAAGAAGCCAACTGATAAAATGTTTGTTGAAGGTCTTGATTTGAAAGATTGGGTTAGCAAATCAATACCACATTCAATCATCGATATTCTTGATGTCAATTTGCTGCATGAAGGGAATCCAAATATCAACAATATATTACCACATATATCATCAATTTTTGAGTTAGCATTAAGTTGTTGCACTGAATCACCAGAAGCACGAATTATGATGACTGATGTTGTGGTCTCTTTGAAAAAGATAAGATTGGTTGGTCAGTTGCATTCATACCATAGGGATGGTAAGGATCAGAGATTATCTGAAGTTGTCCTGTTGACTGTGTTCTGCATTTTGCCATTGAGAGAGAACCTGTTTGAAGAGATGTTGCAAGAAGGCATTGTCGAGAAATGCTCCAAATTTATCAACAGGCTTTTAGTATGGGTTCTGCAAGCAGTTCTAGAAGGTCTTCTCACTCTGGGGAGGTTCAATCGCCACTTCATGCTAATTCAGATTCCAATGGAACTGGGAGGCCGTCAGGCTATTAATCCCTGGTTGGTTTATGAGTTGGCTGAGCATGGTTGTTGA 2427 0.3692 MDDTLKNLLHSCFVPRGIGGLDKLGKLDLSSNYFKGPIPSNIFNISTLTFLNLGSNSLSGVLPSHLGNGLPNLEKLGLDGNELTGQIPNSISNASKLIVLHLSLNKLTKAIPNVIGNLTSLIDLALDGNELTGLIPYTFDKLRSLQRLSLSNNKLQGSIINNFCQLKSLSELNLANNMFLGAISGCLGNTSLQKLNFSSNKFVSHIPSSLWSLKDLLVLDISSNALSGIISAEVSNLRAIILLDLSRNQISGSIPTTMGGLQTLQNLSLAHNKLQGPILESLSDMVSIESIDLSHNYLSGVIPKSLESLHYLKSINLSYNLLDGEIPNGGPFQNLTAQSFMMNKGLCGKSHLHVQPCRKGNKPITNKVMLAIKCLVPIMVVILLVTGIVFLKHNRDDANYATNRDLTNLDAPTRISYYELLQGTNGFDERNLLGFGSFGSVYKAILPNEKIVAVKVFNIDMEEALRSFDIECVAMRNFRHRNLIKIISSCSNDDFKSLIMEFMSNGSLDRWLYYHNYCLDILQRLNIMVDVAAALEYLHHGTSTPIVHCDIKPSNILLDEDMVAHLSDFGIAKLLDEGQLETHTKTLATVGYMAPEYGSKGVVSFKADVYGYGIMLMEMFTRKKPTDKMFVEGLDLKDWVSKSIPHSIIDILDVNLLHEGNPNINNILPHISSIFELALSCCTESPEARIMMTDVVVSLKKIRLVGQLHSYHRDGKDQRLSEVVLLTVFCILPLRENLFEEMLQEGIVEKCSKFINRLLVWVLQAVLEGLLTLGRFNRHFMLIQIPMELGGRQAINPWLVYELAEHGC 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5008g00024 808 SMART serkin_6 427 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5008g00024 808 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 503 710 - -
Pral5008g00024 808 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 15 110 - -
Pral5008g00024 808 SMART LRR_typ_2 237 261 IPR003591 -
Pral5008g00024 808 SMART LRR_typ_2 21 45 IPR003591 -
Pral5008g00024 808 SMART LRR_typ_2 285 308 IPR003591 -
Pral5008g00024 808 SMART LRR_typ_2 142 166 IPR003591 -
Pral5008g00024 808 SMART LRR_typ_2 70 94 IPR003591 -
Pral5008g00024 808 SMART LRR_typ_2 190 213 IPR003591 -
Pral5008g00024 808 SMART LRR_typ_2 118 141 IPR003591 -
Pral5008g00024 808 PANTHER OS04G0122200 PROTEIN 19 113 - -
Pral5008g00024 808 Pfam Leucine rich repeat 121 178 IPR001611 GO:0005515
Pral5008g00024 808 Pfam Leucine rich repeat 263 322 IPR001611 GO:0005515
Pral5008g00024 808 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 111 361 - -
Pral5008g00024 808 Pfam Protein kinase domain 429 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5008g00024 808 ProSitePatterns Protein kinases ATP-binding region signature. 433 455 IPR017441 GO:0005524
Pral5008g00024 808 ProSiteProfiles Protein kinase domain profile. 427 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5008g00024 808 Gene3D Transferase(Phosphotransferase) domain 1 503 719 - -
Pral5008g00024 808 FunFam Serine-threonine protein kinase plant-type 407 502 - -
Pral5008g00024 808 Gene3D Ribonuclease Inhibitor 5 359 IPR032675 -
Pral5008g00024 808 SUPERFAMILY Protein kinase-like (PK-like) 407 699 IPR011009 -
Pral5008g00024 808 Gene3D Phosphorylase Kinase; domain 1 409 502 - -
Pral5008g00024 808 SUPERFAMILY L domain-like 11 344 - -
Pral5008g00024 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5008g00024 Pral-Chr5008 313307 321921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5008g00024 21 703 Receptor kinase-like Gene Family AT3G47570 36.962 5.80e-140 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5008g00024 Pkinase 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5008g00024 - K13420 pcin:129285519 987.252