Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5008g00006 ATGGAGTTTCTTGTGGCAATCGGGACAGGAATTGTGTCAAAACTGGGGGAGATGTTAATGGATCCAATCACGTCGCAATTCAAACATCTGATTCACTATGACAAAAATATCAATAAAATGAAGAATGAACTCAACAACTTGGAAGAAAGGAAGCGTGCTATTGAAGGAATGGTGGACGTAGACAGGAGGAATGGACGTCGCATTGCTCCAAATGTTGAACACTGGCTCTACCAAGTGGACAACATGGTAGAAAACAAATTAAATGAAGTGGACGATCGTGAGTTGGTCAACAAGAGCAAGAAATGCGTCAAAGGGTTGTGTCCAAATTTGGTGTTTCGTTATTTACTGAGCAAGAAAGCAAGAAAAATGGCGCAAGATCTTGTTTCCCTGAAGGAGCAAAAATTTGACTTCATATCCTACCCTGCACCTTTACCATCACTAGGATCCACTTTCACAGAAGGAATTAAGAGCTTTGCCTCAAGAGAATCAATTATTACCGAGGTTGTAGATAAATTGAAGGGTGATGAGTTCAACAGGATAAGCGTTTGTGGGATGGGTGGTGTGGGGAAAACCACATTAGTGAAAGAGCTCATCAAAATTTTAGAAGCAGATAAGGTGTTTGATGAAATTTCAATGGCTATCGTGTCCCAAGTTCCTGACTATAGAAAGATTCAAGGTCAAATTGGTGACACCTTAGGCTTGAAATTTGATAAGGAAACTCTACAAGGAAGGGCAGGCCAACTGCTTGAGAGGCTTAACAAGATCAATAAGGTCCTCGTAGTGCTGGATGATGTATGGACAGAGCTGGATTTCGAGTTGATAGGGCTTCCTTCAAATGGGCAGTGTCACAGGGGGTGCAAAATTTTATTCACATCAAGAAATGAAGATGTGTGCCACAGGATGATAAGTCAGAGGAACTTCACTATGCCCGTTCTCTCTAAAGAAGAAGCATGGGATCTCTTCAGGGATACAGTAGGCGGTCATGTTGTGGACAAAGCTGAGATTCATGACATAGCAAAAGAGGTTGCAAATGAATGTAGGGGTTTGCCAATTGCTATTGTCACAATAGCAAAAGCACTAGGGAACAGGGAGAAGCATGCATGGGAGGATGCACTTGATCAGCTGAGAAAGTCTTCACTAACTTCCTTCTCAGAGATGCAAGAATATTCTATATATTCATGTATTGAATTAAGCTATGACTTTCTAGGCAACGAAGAAGCTAAATTTCTCCTTTTGCTTTGTTGCTTATTCCCAGAAGACTTTGACATTCCTATTGAAGTTCTTCTAAGATATGGAGTGGGCTTGGGTTTGTTCAAGGATCTGGGTGCTTTGTGTAAAGCAAGGAATCGAGTGCATACCTTGGTTGATACTCTAAAGAAGCGGTTTTTGTTGCTGGACAGCAATGAGGAAGAGTGTGTGAAAATGCATGATGTCGTTCGTGATACTGTCATAACAATTGGATCCAAAGAAGAGCATGGATTTGCAGTGAAATATGATGCCGGACAGACGGGGTCAAAGGAGTTTATATGGCATCATAGTGCAATCTCACTTGTGTTTGATGAGATTAAGATGCATCCTAAGCGTTTGCAGTGTCCAAACCTTAGACTTTTGCAACTTTATTTAAAGAGAAGAGAACCCATTTCCGAAAATTTCTTCCATAACATGGGCAAGCTAACGGTTTTAGGCATAAGCAATCTGTGCGTTCCATCAATGTCATCTCCATTCCGATCACTCAACAGCCTCTGCACCTTACGGTTGGAAGATTGTCAGGTTGGAGACATATCGGTAATCTGTAAGGAGCTAAGGAAACTGGAAGTGTTAAGCTTTGCCCGCTCAAATATCAAAGAATTGCCAGCAGAAATAGGCAAACTAAGCCTTCTAAGACTGTTGGATTTGACAGATTGCAATGATCTTGATTAG 1920 0.4135 MEFLVAIGTGIVSKLGEMLMDPITSQFKHLIHYDKNINKMKNELNNLEERKRAIEGMVDVDRRNGRRIAPNVEHWLYQVDNMVENKLNEVDDRELVNKSKKCVKGLCPNLVFRYLLSKKARKMAQDLVSLKEQKFDFISYPAPLPSLGSTFTEGIKSFASRESIITEVVDKLKGDEFNRISVCGMGGVGKTTLVKELIKILEADKVFDEISMAIVSQVPDYRKIQGQIGDTLGLKFDKETLQGRAGQLLERLNKINKVLVVLDDVWTELDFELIGLPSNGQCHRGCKILFTSRNEDVCHRMISQRNFTMPVLSKEEAWDLFRDTVGGHVVDKAEIHDIAKEVANECRGLPIAIVTIAKALGNREKHAWEDALDQLRKSSLTSFSEMQEYSIYSCIELSYDFLGNEEAKFLLLLCCLFPEDFDIPIEVLLRYGVGLGLFKDLGALCKARNRVHTLVDTLKKRFLLLDSNEEECVKMHDVVRDTVITIGSKEEHGFAVKYDAGQTGSKEFIWHHSAISLVFDEIKMHPKRLQCPNLRLLQLYLKRREPISENFFHNMGKLTVLGISNLCVPSMSSPFRSLNSLCTLRLEDCQVGDISVICKELRKLEVLSFARSNIKELPAEIGKLSLLRLLDLTDCNDLD 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5008g00006 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 411 IPR027417 -
Pral5008g00006 639 Pfam NB-ARC domain 162 400 IPR002182 GO:0043531
Pral5008g00006 639 Coils Coil 30 57 - -
Pral5008g00006 639 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 636 - -
Pral5008g00006 639 Gene3D - 311 397 IPR042197 -
Pral5008g00006 639 SUPERFAMILY L domain-like 474 635 - -
Pral5008g00006 639 SMART AAA_5 176 322 IPR003593 GO:0016887
Pral5008g00006 639 FunFam Probable disease resistance protein At1g61300 149 306 - -
Pral5008g00006 639 Gene3D Ribonuclease Inhibitor 495 639 IPR032675 -
Pral5008g00006 639 Gene3D - 148 308 IPR027417 -
Pral5008g00006 639 PRINTS Disease resistance protein signature 252 266 - -
Pral5008g00006 639 PRINTS Disease resistance protein signature 622 638 - -
Pral5008g00006 639 PRINTS Disease resistance protein signature 179 194 - -
Pral5008g00006 639 PRINTS Disease resistance protein signature 346 360 - -
Pral5008g00006 639 Gene3D - 398 485 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5008g00006 Pral-Chr5008 56106 58025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5008g00006 180 521 WRKY Transcription Factor Family AT5G45050 26.257 9.99e-11 63.2