Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5008g00002 ATGAAACCGTTGAGACAGCAACGAGTCTGCAAGGCCTTGTGTTGCAGCTGTAATTGCAGACTCAGTGTTTCTTCTTCCTCAGAACTAGAAGCAGAAAGCAGTTCTTCATCAGCTTCTGATAGGTTCCCTTCTGTTTCAAGCTTAGCCCACGCCATGGTTCAAGAAAGGCTTGATCAGATGATAAGAGATCAGAGAGAGAGGAACATGAGGCTTCACCATCATCATCATAATAATAGTCATCTGCAACAGCATCATCATCGTCTTCATGATCAGAATGATCTGCAGAAGAAGCGAAGAGAAGAAGCTGCTGCCGGGACCAAGTTCGTGGTGATGATGGCGATGGAGAAGAGTTCTTATGATCCAAGAGAGGATTTCAGAGAGTCCATGGTGGAGATGATAATGGCGAATCGACTTCAAGATGCTAAAGAACTTCGGAGTCTGTTAAATTATTATGTTTCAATGAATTCACAAGAGTACCATAGTCTTATACTCGAGGTCTTTCATGAGGTTTGTACCAATCTCTTCTTATCATGTAAATGCCAATATTGGTAA 552 0.4221 MKPLRQQRVCKALCCSCNCRLSVSSSSELEAESSSSSASDRFPSVSSLAHAMVQERLDQMIRDQRERNMRLHHHHHNNSHLQQHHHRLHDQNDLQKKRREEAAAGTKFVVMMAMEKSSYDPREDFRESMVEMIMANRLQDAKELRSLLNYYVSMNSQEYHSLILEVFHEVCTNLFLSCKCQYW 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5008g00002 183 Pfam Transcriptional repressor, ovate 118 175 IPR006458 -
Pral5008g00002 183 NCBIfam uncharacterized plant-specific domain TIGR01568 112 175 IPR006458 -
Pral5008g00002 183 ProSiteProfiles OVATE domain profile. 114 173 IPR006458 -
Pral5008g00002 183 MobiDBLite consensus disorder prediction 75 99 - -
Pral5008g00002 183 MobiDBLite consensus disorder prediction 84 99 - -
Pral5008g00002 183 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 32 175 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5008g00002 Pral-Chr5008 21278 21829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral5008g00002 Ovate 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5008g00002 - - pcin:129293050 200.675