Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5005g00035 ATGGTTGGACCGGCCCAACCTCCTAAATCCACCCTCAAATTCCTCTGTAGCTACGGCGGCAAAATCCTTCCCCGCTATCCCGACGGCAAGCTCCGTTATATCGGTGGCCATACACGTGTCCTCTCCGTCGACCGATCTATTTCCTTTTCCGAGCTGTTGGTGAAGTTGGGAGAGCTCTGTGGCTCGGAAGCTGTGACACTTCGCTGTCAATTGCCCACCGAAGATCTCGATGCTTTGGTATCTATCAGCTCTGACGAGGATCTGGCGAATCTGATCGAGGAATACGATCTGGTTGCGCTGCCGTCATCTTTAAAGATCAGAGCGTTCCTTTCGCCGCCGAAATCGTTGCAGAAAAAACATTCTATTCCGTCCTCGTCGTCTATGTCAAAATCATTATCATCTTCATCTACGTCTTCGTCCTTGTCACCTCACAATTCTACTGCTGGTAGTTGTGGATGCTCTACTTGTGGCTGCAGCCCAAGATACTCGGTGTTGGTGACGCCGGTCGTCGATCGATGTGCGCGTCAGATGTCAGCGCCGATAGCGTTTGACTTGAGAAAATCTGCTGGGAGGAATATTCTTCTTCCTCAATATGCTTACCCGACGCAGGGAAACCCGGGCAACATTTGCGTCATGCACAGCGGGAACCACTGGCCATAG 660 0.5152 MVGPAQPPKSTLKFLCSYGGKILPRYPDGKLRYIGGHTRVLSVDRSISFSELLVKLGELCGSEAVTLRCQLPTEDLDALVSISSDEDLANLIEEYDLVALPSSLKIRAFLSPPKSLQKKHSIPSSSSMSKSLSSSSTSSSLSPHNSTAGSCGCSTCGCSPRYSVLVTPVVDRCARQMSAPIAFDLRKSAGRNILLPQYAYPTQGNPGNICVMHSGNHWP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5005g00035 219 Pfam PB1 domain 28 111 IPR000270 GO:0005515
Pral5005g00035 219 Gene3D - 30 110 - -
Pral5005g00035 219 SMART PB1_new 26 111 IPR000270 GO:0005515
Pral5005g00035 219 MobiDBLite consensus disorder prediction 117 140 - -
Pral5005g00035 219 CDD PB1_UP2 15 110 - -
Pral5005g00035 219 MobiDBLite consensus disorder prediction 115 140 - -
Pral5005g00035 219 SUPERFAMILY CAD & PB1 domains 28 116 - -
Pral5005g00035 219 PANTHER OS05G0427100 PROTEIN-RELATED 7 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5005g00035 Pral-Chr5005 276406 277576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5005g00035 13 110 MAP Kinase Kinase Kinase AT2G35050 55.102 1.05e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5005g00035 - - gmx:100815157 224.942