Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5001g00082 ATGGAAAACCACCTCCTGCAGGTGGACCCACCAAGCCCTCCACCTCCGCCGCTGCTTCCATCATCGCCGCCTCAAAACCCTACCTTCATCTTCCCGGGCTCACCGCCAGGGGTGGAAGCATCGTCGTCATCGGTGCTGGAAAAGCCGCTGGACCCTCAAGGGCTGCTTGACATTGACTGGGCTAACATATTCTCAGGGCAGAGCAATAACTTTCAGGTTGGGGTTGGGGACGCCGTTAATATTACAAGCAGTTACAAGCCAATGATGGAAGGAGGAGGTGGTGGTGTTGGTGGTTTATCATCGTCGACTTTAATGGGTGAAATGAATGGAGGTCATGAGGATATGGAAAAGGAGAGTCATAATAAAGAGAAAAGAAGAGGAGGAGGAGGTAGGCTGAAGAAGTCGACGAGGCCGAGGTTTGCTTTTCAGACCAGAAGTGCTGATGATATTCTCGACGATGGTTATCGTTGGAGGAAGTACGGCCAGAAAGCTGTCAAGAACAGCGTATATCCCAGGAGCTACTACAGATGCACGCACCACACATGCAATGTGAAGAAACAGGTGCAGAGGTTGTCGAGAGATACAGGCATCGTGGTGACAACGTACGAGGGAATTCACAACCACCCGTGTGAGAAGCTCATGGAAACCCTCACCCCTCTCCTCAAGCAGATCCAATTCCTTACCAGGTTCTAG 693 0.5137 MENHLLQVDPPSPPPPPLLPSSPPQNPTFIFPGSPPGVEASSSSVLEKPLDPQGLLDIDWANIFSGQSNNFQVGVGDAVNITSSYKPMMEGGGGGVGGLSSSTLMGEMNGGHEDMEKESHNKEKRRGGGGRLKKSTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSVYPRSYYRCTHHTCNVKKQVQRLSRDTGIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLTRF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5001g00082 230 Pfam WRKY DNA -binding domain 152 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5001g00082 230 FunFam WRKY transcription factor 57 137 211 - -
Pral5001g00082 230 MobiDBLite consensus disorder prediction 105 136 - -
Pral5001g00082 230 SUPERFAMILY WRKY DNA-binding domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5001g00082 230 MobiDBLite consensus disorder prediction 8 31 - -
Pral5001g00082 230 Gene3D WRKY domain 136 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5001g00082 230 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 212 IPR044810 GO:0003700
Pral5001g00082 230 MobiDBLite consensus disorder prediction 110 125 - -
Pral5001g00082 230 ProSiteProfiles WRKY domain profile. 146 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5001g00082 230 MobiDBLite consensus disorder prediction 1 46 - -
Pral5001g00082 230 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5001g00082 Pral-Chr5001 488103 491969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5001g00082 126 230 WRKY Transcription Factor Family AT5G41570 70.755 2.92e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5001g00082 WRKY 1.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5001g00082 - - pvy:116141408 236.113