Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5001g00075 ATGGAGGACGATTGGGATCTGCACGCCGTCGTCAGAGGATGCTCCACCGTCTCCTCCTCATCTTCCTCCGGCTCTTCCTCCGCCGTCACCGCCACCTCCTCAGCATCTTCCTCTGTTTTTGGGCTTCCTATGTTTGTTGGGACGGAAAAAGTTAGCCAGGTCTTGCCCCTCTCAGATTTAGACCCTCTTGAAGCCAGACCTTCTTCCTCCATTGAAGAATTGCACGAGCTCTGTAAGCCTTTCTTCGCCAAATCAACCAAGCCTCCTTCTTCATCGTCTTCTCTAGTTTCTCCCCTCTCTCCTTCTTCTTCCTCCTTCTCCTACAATTCTCCCTCTGCCCCCGCCAAACCTGTTCAGACACCGCACAAACAACAGAATCTGCAGCCTAAGAATAAGATGTCTCATCCTGGTCCTGTTTCCACTACCCCAAGATCTAAAAGAAGGAAGAATCAGCTTAAGAAAGTTTGTCAGGTTCCAGCCGAGTCTCTCTCCTCTGATATCTGGGCATGGCGGAAATATGGCCAGAAACCCATCAAAGGCTCTCCATATCCGAGGGGATATTACAGATGTAGCAGCTCGAAAGGATGCTTGGCTCGGAAACAAGTCGAGAGGAACAGATCGGACCCATCGATGTTCATAGTCACCTACACGGCGGAGCACAACCACCCTGCTCCTACTCATCGGAACTCTCTCGCCGGTTCCACCCGCCAGAAGCCCTCGACAACCGCCGGCGATGGCTCCGGCTCCGGCGTTGAAACAGACAAAGCCCCGGCGAAAGTCGGTTCTCCGGCGACCTCTGGTGTGGAAGAAGAAGACACAGTACCTCAAAGCACAGGCCTCGAAAGCAAGGTGGAAATGGAAGATTTGATGGAGGAAGAGGAAGACGATGAGCTTGGGTTATCAGATTCGGTGTTAACAGATGATTTCTTCGAAGGGTTAGATGAACTTACGGGGCCGTCACCTCCGGCGGCGGAGCCCATTCCCGGAGACTGCTTCGCCGAACCCTTCTCTACTGGTTTCACTCTCCCGGCGTGGCCGACAACAAACGCTGCCGCCACCACCGCCGGCGGCAATTGTTGA 1080 0.537 MEDDWDLHAVVRGCSTVSSSSSSGSSSAVTATSSASSSVFGLPMFVGTEKVSQVLPLSDLDPLEARPSSSIEELHELCKPFFAKSTKPPSSSSSLVSPLSPSSSSFSYNSPSAPAKPVQTPHKQQNLQPKNKMSHPGPVSTTPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPSMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTTAGDGSGSGVETDKAPAKVGSPATSGVEEEDTVPQSTGLESKVEMEDLMEEEEDDELGLSDSVLTDDFFEGLDELTGPSPPAAEPIPGDCFAEPFSTGFTLPAWPTTNAAATTAGGNC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5001g00075 359 MobiDBLite consensus disorder prediction 222 248 - -
Pral5001g00075 359 MobiDBLite consensus disorder prediction 84 156 - -
Pral5001g00075 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 317 IPR044810 GO:0003700
Pral5001g00075 359 MobiDBLite consensus disorder prediction 15 36 - -
Pral5001g00075 359 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5001g00075 359 MobiDBLite consensus disorder prediction 219 282 - -
Pral5001g00075 359 SMART WRKY_cls 164 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5001g00075 359 SUPERFAMILY WRKY DNA-binding domain 162 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5001g00075 359 ProSiteProfiles WRKY domain profile. 159 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5001g00075 359 MobiDBLite consensus disorder prediction 85 145 - -
Pral5001g00075 359 Gene3D WRKY domain 148 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5001g00075 359 FunFam WRKY transcription factor 22 148 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5001g00075 Pral-Chr5001 454683 456580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5001g00075 1 357 WRKY Transcription Factor Family AT4G01250 46.739 6.03e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5001g00075 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5001g00075 K13425 - gmx:100170675 342.043