Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5001g00060 ATGGTGTCCGTGAACCCAAATCCATCTCAAGGTTTTTATTTCTTCGATCCCATGAATACTGGCCTTCCCGGTCTCAATCACACTCTGCCGCCCCCGACGGCGACTCCGGCCGCTGCCAATACGTATTCGGATGATCCGAACAAGAAGATTCGAAAACCGTATACGATTACTAAGTCCAGAGAGAATTGGTCCGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGATCGTGATTGGAAGAAGATTGAAGCATTTGTTGGGTCAAAAACTGTTATCCAGATAAGAAGTCATGCGCAGAAGTATTTTCTAAAAGTTCAGAAGAATGGGACTAGCGAACATGTACCTCCTCCCCGGCCGAAGAGAAAAGCTGCTCATCCTTATCCACAAAAGGCCCCTAAAAATGCTGCATTGGTATCTCAAGGTACCGGACCAATGCAATCTTCATCTGTTTTTGCGGAGCCTGCATACATTTATAGGCCAGATTTGTCATCCGTGCTTGGAACACCTGTTACCAGTGTGCCTTTGTCATCCTGGAATTGTGATGCTATGCCGCCCGTCAGCATGCCACAAGTGGCTAAAGATGATATAGGATTAGCTGGACAAGCTGTTCCTCGTAATTGTTGCTATAGCAGTAGTAATGAGAGCGCTCCTGGAGTTTGGCCTAATAATAAATGTACAGATCAAGTGGACCAAGGCAAGCTGATAAGTGTAATGCCAGATTTTGCGCAAATCTATAGGTTCATCGGTAGTGTGTTTGATCCAAATGCAACTGATCATCTACAGAGACTGAAAAAGATGGACCCAATAAATGTGGAAACAGTATTGTTGTTGATGAGAAACCTCTCCATCAATTTAACGAGTCCTAAGTTTAAGGATCATCAGAAATTGCTTTCGTCGTATGATGTTGACCTGAGGAAGGCGAAGACTGGTAGTCTCTACAATGATCCCCTGACCAACAAATCCGAAAGTGCTGTTCTGTCTGCTTAG 996 0.4458 MVSVNPNPSQGFYFFDPMNTGLPGLNHTLPPPTATPAAANTYSDDPNKKIRKPYTITKSRENWSEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAALVSQGTGPMQSSSVFAEPAYIYRPDLSSVLGTPVTSVPLSSWNCDAMPPVSMPQVAKDDIGLAGQAVPRNCCYSSSNESAPGVWPNNKCTDQVDQGKLISVMPDFAQIYRFIGSVFDPNATDHLQRLKKMDPINVETVLLLMRNLSINLTSPKFKDHQKLLSSYDVDLRKAKTGSLYNDPLTNKSESAVLSA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5001g00060 331 PANTHER SWI/SNF COMPLEX-RELATED 37 289 - -
Pral5001g00060 331 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Pral5001g00060 331 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Pral5001g00060 331 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Pral5001g00060 331 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Pral5001g00060 331 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Pral5001g00060 331 ProSiteProfiles SANT domain profile. 58 111 IPR017884 -
Pral5001g00060 331 MobiDBLite consensus disorder prediction 109 133 - -
Pral5001g00060 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Pral5001g00060 331 CDD SANT 62 105 IPR001005 -
Pral5001g00060 331 Gene3D - 62 110 - -
Pral5001g00060 331 SMART sant 59 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5001g00060 Pral-Chr5001 340611 344273 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5001g00060 Myb_DNA-binding 7.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5001g00060 - - gmx:778090 474.937