Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5001g00055 ATGTTAGCATACGATGCCGCTTTTCTCGATAAAGAGCTATCTAAACGCACCTCAATATTTGGCCTCCCTCTCTGGGTCGTCGTAGGAATCGTCGTCGGCGCCGTCATCGTCCTCGCTCTCTTCCTCCTCTCCCTCTGCCTAACCTCTCGCCGCCACCGGCGCCGCCACAATCCAAAGAAGATTTTTGATCCCACAGATAGTGGCACTCCTGTTGTATCGAAGGAAATCCAGGAGATCGTCCACCTACGTGGCCCCAACCAGCACCACCCTGCGCCACCGCCGGAGATCCATGCTGACATCGGAAAATCAGAGCACCGAGTCGTGGTGTTTTCCGATCGGATTTCTAGTGGAGAGAGCAGGGGCACGGCCTTGAGTGCTTCCGAGACGACGTCGTCTTTTGGTGGTGGGACTGGGAGTGCCGGGCCAGAAGTCTCGCATCTTGGGTGGGGTAGATGGTACACTCTGAGAGAGCTTGAAGTTGCGACTAATGGGTTTTGTGAAGAAAACGTGGTTGGGGAAGGTGGCTATGGAATAGTGTACAAAGGAGCACTCAGTGATGGTACTCGAGTTGCAGTAAAAAACCTTCTCAATAATAAGGGCCAAGCTGAGAAAGAATTTAAAGTGGAGGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGCTGCTCGGATACTGTGTTGAGGGAGCATACAGGATGCTTGTGTATGAGTATGTTGACAATGGCAATCTAGAACAATGGCTTCATGGGGATGTTGGAGCTGTAAGCCCTCTGACGTGGGATATCCGTATGCACATTATACTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTGGAACCAAAGGTTGTTCACCGGGATGTAAAGTCTAGCAACATACTCCTAGATCGCCAATGGAACTCGAAAGTTTCAGACTTTGGGCTTGCTAAGCTCTTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTCATGGGCACATTTGGTTATGTTGCGCCAGAGTATGCCTGCACTGGAATGCTGACTGAAAAGAGTGATATTTATAGCTTTGGAATACTTATCATGGAGATGATTACTGGGAGAAGTCCTGTCGATTATAGCAGACCACAAGGAGAGGTTAATTTAATAGATTGGTTAAAAACCATGGTTGGAAATCGAAAAGCCGAGCAAGTAGTCGATCCTAAACTCCCCGAGATGCCATCTTCAAAGGCTCTCAAACGGGCACTGCTGGTTGCTCTTCGATGCGTGGATCCTGATGCAACTAAGAGGCCTAAAATGGGGCATATCATCCACATGCTGGAGGCAGATGACCTACTATTCCCTGATCCTCAGGAACGCCGGATCAGGGGAGAATCTTCACATTCCAATCGTGATCGTCAAGAGAAGAAGGAATTGAATTCAGATAAAAGAAGTAATGGAGAAGGGATCACTGATCAAAGTGAAGCACATGATAGTAGTAGAAGTCATCATCAGCCAACTGGTTTAACTGGTTGGACGCTTATATTCCTATCAACCTTATTAGAGTCCTACATTTATAATCCTATCAAGCTGGATTTGGACAAACTGGGAAAATGGTACGTGCTTGTGTATAAATATAAAAGAAGCAAAGAGGATTGGATCAAAAATGAAACGGCAACTTCATTGATGGAGGGTTGTGAGAAAAATACAAACAGGGCGGCCCGACAAGAACACGTGTGTTGTCTGCAAATTTTTGTCAGTAGTTGA 1734 0.47 MLAYDAAFLDKELSKRTSIFGLPLWVVVGIVVGAVIVLALFLLSLCLTSRRHRRRHNPKKIFDPTDSGTPVVSKEIQEIVHLRGPNQHHPAPPPEIHADIGKSEHRVVVFSDRISSGESRGTALSASETTSSFGGGTGSAGPEVSHLGWGRWYTLRELEVATNGFCEENVVGEGGYGIVYKGALSDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWDIRMHIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEMITGRSPVDYSRPQGEVNLIDWLKTMVGNRKAEQVVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHIIHMLEADDLLFPDPQERRIRGESSHSNRDRQEKKELNSDKRSNGEGITDQSEAHDSSRSHHQPTGLTGWTLIFLSTLLESYIYNPIKLDLDKLGKWYVLVYKYKRSKEDWIKNETATSLMEGCEKNTNRAARQEHVCCLQIFVSS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5001g00055 577 MobiDBLite consensus disorder prediction 119 141 - -
Pral5001g00055 577 Gene3D Transferase(Phosphotransferase) domain 1 241 443 - -
Pral5001g00055 577 MobiDBLite consensus disorder prediction 451 494 - -
Pral5001g00055 577 SMART serkin_6 165 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00055 577 SUPERFAMILY Protein kinase-like (PK-like) 144 437 IPR011009 -
Pral5001g00055 577 FunFam Probable serine/threonine-protein kinase At1g01540 145 240 - -
Pral5001g00055 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Pral5001g00055 577 Pfam Protein kinase domain 167 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00055 577 ProSiteProfiles Protein kinase domain profile. 165 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00055 577 CDD STKc_IRAK 171 437 - -
Pral5001g00055 577 FunFam Putative receptor-like serine/threonine-protein kinase 241 452 - -
Pral5001g00055 577 PANTHER OS01G0323000 PROTEIN 7 467 - -
Pral5001g00055 577 MobiDBLite consensus disorder prediction 451 491 - -
Pral5001g00055 577 MobiDBLite consensus disorder prediction 119 138 - -
Pral5001g00055 577 Gene3D Phosphorylase Kinase; domain 1 148 240 - -
Pral5001g00055 577 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5001g00055 Pral-Chr5001 325410 329411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5001g00055 26 492 Trihelix Transcription Factor Family AT5G38560 37.317 1.19e-92 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral5001g00055 Pkinase 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5001g00055 - - pvy:116134269 719.924