Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5001g00047 ATGTCTGTTCAATCACTCTCTGCTTCAGCTGAGCACAACATCCAAGGGGCGCCCACTCATGGTGGACGCTACGTTCAGTACAATGTGTACGGAAACCAATTCGAGGTTTCCAGAAAGTACGTGCCTCCACTTCGGCCTGTGGGCAGAGGTGCTTACGGTATTGTTTGTGCTGCTGTAAATGCTGAGACACGTGAGGAAGTTGCAATTAAGAAGATTGGCAATGCATTCGACAACAGAATAGATGCCAAAAGGACCTTACGTGAAATTAAACTGCTTCGGCACATGGATCATGAAAATGTCATAGCCCTCAAAGACATCATTCGACCTCCACAGAAGGAGAATTTCAATGATGTGTACATTGTGTATGAATTAATGGACACTGATCTGCACCAAATAATACGTTCCAATCAACTGTTGACTGATGATCATTGTCGGTATTTTCTGTATCAGTTGCTACGAGGACTCAAATATATACATTCAGCAAATGTTTTGCATCGTGATTTAAAGCCGAGCAATTTGTTCTTGAATGCCAATTGTGACCTTAAGATTGGAGACTTTGGGCTTGCCAGAACTACGTCTGAAACTGATTTTATGACTGAGTATGTGGTCACTCGATGGTACCGGGCTCCAGAATTGCTTCTTAATTGTTCAGAATATACTGCTGCTATTGACATATGGTCTGTTGGTTGTATCCTTGGTGAAATGATGGTAAGGCAGCCCCTCTTCCCTGGCAAAGATTATGTCCATCAGCTGAGACTAATCACAGAGGCTACCGTGTTGAGAAATGATAATGACAAAATTCCGTATCCTTTCAAAGCTCATAGGTTCACCTGA 834 0.4281 MSVQSLSASAEHNIQGAPTHGGRYVQYNVYGNQFEVSRKYVPPLRPVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVIALKDIIRPPQKENFNDVYIVYELMDTDLHQIIRSNQLLTDDHCRYFLYQLLRGLKYIHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEMMVRQPLFPGKDYVHQLRLITEATVLRNDNDKIPYPFKAHRFT 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5001g00047 277 SUPERFAMILY Protein kinase-like (PK-like) 44 257 IPR011009 -
Pral5001g00047 277 FunFam Mitogen-activated protein kinase 26 135 - -
Pral5001g00047 277 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Pral5001g00047 277 Gene3D Transferase(Phosphotransferase) domain 1 125 258 - -
Pral5001g00047 277 SMART serkin_6 41 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00047 277 FunFam Mitogen-activated protein kinase 125 267 - -
Pral5001g00047 277 ProSiteProfiles Protein kinase domain profile. 41 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00047 277 Pfam Protein kinase domain 45 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00047 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral5001g00047 277 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 39 257 - -
Pral5001g00047 277 Gene3D Phosphorylase Kinase; domain 1 24 124 - -
Pral5001g00047 277 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5001g00047 Pral-Chr5001 308985 312046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5001g00047 1 256 MAP Kinase Gene Family AT4G01370 86.434 1.82e-169 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral5001g00047 Pkinase 1.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5001g00047 K20600 - jre:109003519 495.738