Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5001g00046 ATGTCTGTTCAATCACTCTCTGCTTCAGCTGAGCACAACATCCAAGGGGCGCCCACTCATGGTGGACGCTACGTTCAGTACAATGTGTACGGAAACCAATTCGAGGTTTCCAGAAAGTACGTGCCTCCACTTCGGCCTGTGGGCAGAGGTGCTTACGGTATTGTTTGTGCTGCTGTAAATGCTGAGACACGTGAGGAAGTTGCAATTAAGAAGATTGGCAATGCATTCGACAACAGAATAGATGCCAAAAGGACCTTACGTGAAATTAAACTGCTTCGGCACATGGATCATGAAAATGTCATAGCCCTCAAAGACATCATTCGACCTCCACAGAAGGAGAATTTCAATGATGTGTACATTGTGTATGAATTAATGGACACTGATCTGCACCAAATAATACGTTCCAATCAACTGTTGACTGATGATCATTGTCGGTATTTTCTGTATCAGTTGCTACGAGGACTCAAATATATACATTCAGCAAATGTTTTGCATCGTGATTTAAAGCCGAGCAATTTGTTCTTGAATGCCAATTGTGACCTTAAGATTGGAGACTTTGGGCTTGCCAGAACTACGTCTGAAACTGATTTTATGACTGAGTATGTGGTCACTCGATGGTACCGGGCTCCAGAATTGCTTCTTAATTGTTCAGAATATACTGCTGCTATTGACATATGGTCTGTTGGTTGTATCCTTGGTGAAATGATGGTAAGGCAGCCCCTCTTCCCTGGCAAAGATTATGTCCATCAGCTGAGACTAATCACAGAGGTTCACCTGATGATGCTAGCCTTGGATTTCTGCGGAGTGATAATGCTCGTAGATATGTAA 828 0.4312 MSVQSLSASAEHNIQGAPTHGGRYVQYNVYGNQFEVSRKYVPPLRPVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVIALKDIIRPPQKENFNDVYIVYELMDTDLHQIIRSNQLLTDDHCRYFLYQLLRGLKYIHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEMMVRQPLFPGKDYVHQLRLITEVHLMMLALDFCGVIMLVDM 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5001g00046 275 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Pral5001g00046 275 SUPERFAMILY Protein kinase-like (PK-like) 44 257 IPR011009 -
Pral5001g00046 275 Gene3D Transferase(Phosphotransferase) domain 1 127 257 - -
Pral5001g00046 275 Pfam Protein kinase domain 45 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00046 275 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 39 257 - -
Pral5001g00046 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral5001g00046 275 Gene3D Phosphorylase Kinase; domain 1 29 126 - -
Pral5001g00046 275 SMART serkin_6 41 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00046 275 ProSiteProfiles Protein kinase domain profile. 41 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5001g00046 275 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral5001g00046 275 FunFam Mitogen-activated protein kinase 26 135 - -
Pral5001g00046 275 FunFam Mitogen-activated protein kinase 125 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5001g00046 Pral-Chr5001 308953 312045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5001g00046 1 257 MAP Kinase Gene Family AT4G01370 86.100 6.64e-170 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral5001g00046 Pkinase 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5001g00046 K20600 - jre:109003519 496.123