Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5001g00026 ATGGAGTTGCACGCAGAATTCGAGGGGTCCTTGTCGGACTGTACTGATGAAGAGTTGGGAGATGAGATGTGTCAACGTTCTGAGTTTAAAACTGAATATGAACGCCAGGATGGTGGGGTGTTGTTCGATGCTAAGGGAGTGAAGAGCAGGTCTGGAGGGGCCAAAAAAGTTCAGAATGGAGGATTTATTGATTTAAATATACCAGGATTTGACTTGAATGAACTCGCAACAACAATTGAGTTGAATGAACTCAGTCCAGGAAATTTGTGCATTAAGAGTGAGGTAAACAAAATGCCCATATTATCGGATGGAGGCATGAAATGTGCCAATGATGATGATATTTTGATATTGGACCCATCTGATGTAAATGAAGAGAGCTTCAATCGTAAAAGGAAGAGGGAGTCTATGCAGGGAATGCTAAACTGGTTGACTGGCATTGCAAAGAATCCCTGTGATCCTGTTGTTGATTCGATGCCTGAAAAATCAAAGTGGAGGTCTCACACCAACGAGAAGGTCTGGAAGCAGGTTTTATTGTTTCGGGAGGCTGTTTTTCTAAAGCGACATGCTGATTCAAGCAGTGAACAACTGAATTGGCAGAGACAAAAGATGCATCCATCTATGTATGAAGATCACCTTGAGGCAACGTACAATCTTAGGGAGAGGTGGAAGTGTGCCAAGAAGCTTATATTTGAAAAATCTATGTCTGCAAGAGTCTCTTCAGATTCATCCATTGAAACCAAGGGTAATCTGGAGAAAACTTCAAGTCCTCACAATGAAGATTCTGCTGAGAAAGAGCTGCCTGATTCCTCAAGTGCGCCATCGGGTATTGACAAATGTGGCATAGTTCCCATCCCTCTGGGGCCAAGTCACCAAGCTAAAGTACCAGAATGGACTGGCATGACTTCTGAAAGTGATTCCAAGTGGTTGGGGACCCGAATATGGCCATTAGAGAAAGTGAATCACAGACTCCTGATTGAGAGGGACCCCATTGGCAGGGGAAGACAAGATTCATGTGGCTGCCAAGTACCAGGTTCTGTTGAATGTGTCAGATTTCACGTTTCCGAGAAAAGGGCTAAGGTGAAGCTGGAGTTAGGTGTGGCTTTTTACCTGTGGAATTTACATAGGGTCGGTGAAGATGTTAGGCAATCATGGACAGTGGATGAAGAGAAGAAGTTTAAGGATGTGGTGCGATCAAATCCTCCATCATTAGAGAGATACTATTGGGATCATATTTTTAAAGCCTTTCCTAAGAAGACCAGGGAAGATTTAGTTAGCTACTATTTCAATGTCTATCTTTTGCAGCGCCGAGGATACCAGAACAGGAGTACTCCAAATGAAATTGATAGTGATGATGAAGAATCAGAATTTGGACCCTTGAGGAATGTTTTTGGACAACAAGCACAGAAGCCAGCCAGTTCCATCTTACTAACCCCCAAAAAGTCTCAGACAAAGAACAAATAG 1461 0.4305 MELHAEFEGSLSDCTDEELGDEMCQRSEFKTEYERQDGGVLFDAKGVKSRSGGAKKVQNGGFIDLNIPGFDLNELATTIELNELSPGNLCIKSEVNKMPILSDGGMKCANDDDILILDPSDVNEESFNRKRKRESMQGMLNWLTGIAKNPCDPVVDSMPEKSKWRSHTNEKVWKQVLLFREAVFLKRHADSSSEQLNWQRQKMHPSMYEDHLEATYNLRERWKCAKKLIFEKSMSARVSSDSSIETKGNLEKTSSPHNEDSAEKELPDSSSAPSGIDKCGIVPIPLGPSHQAKVPEWTGMTSESDSKWLGTRIWPLEKVNHRLLIERDPIGRGRQDSCGCQVPGSVECVRFHVSEKRAKVKLELGVAFYLWNLHRVGEDVRQSWTVDEEKKFKDVVRSNPPSLERYYWDHIFKAFPKKTREDLVSYYFNVYLLQRRGYQNRSTPNEIDSDDEESEFGPLRNVFGQQAQKPASSILLTPKKSQTKNK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5001g00026 486 MobiDBLite consensus disorder prediction 465 486 - -
Pral5001g00026 486 CDD SANT 383 430 IPR001005 -
Pral5001g00026 486 SMART sant 380 433 IPR001005 -
Pral5001g00026 486 MobiDBLite consensus disorder prediction 252 266 - -
Pral5001g00026 486 MobiDBLite consensus disorder prediction 240 274 - -
Pral5001g00026 486 MobiDBLite consensus disorder prediction 441 486 - -
Pral5001g00026 486 Pfam Myb-like DNA-binding domain 381 429 IPR001005 -
Pral5001g00026 486 SMART ELM2_2 284 335 IPR000949 -
Pral5001g00026 486 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 98 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5001g00026 Pral-Chr5001 147537 151068 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5001g00026 Myb_DNA-binding 2.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5001g00026 - - pcin:129291322 901.353