Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5000g00002 ATGTCCAGTGGAAGTGAGAAAACGTCGACAAAGCTAAGGACTAAGCTTGCTGTTGCGGTAAAGAGCATTCAATGGAGCTACGGCATTTTCTGGGCATCTTCCTCTACCAAGCAACGAACATTGGAATGGAACGAAGGGTACTACAATGGTGAAATCAAGACAAGGAAGACAGTCCAATCCATGATGGAACTAAAGGCTGATAAAATAAGGTTTCAGAGAAGTGAGCAACTAAGAGAACTCTATCAGTTTCTTCTTGTTGGCGAAACGGATTCGCAGGCTAAAAGGCCTTCTGCTGCATTATCTCCAGAGGATCTCACGGACTTAGAGTGGTACTACTTGGTTTGCATGTCCTTTATGTTCAACCACAGCCAAAGTTTGCCTGGAAGAGCACTAGAAAAGGGTGAAACCATCTGGTTATGCAATGCTCAATATGCAGACAGCAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCATCAATTCAGACTGTGGTGTGTTTTCCCTACCTAGGGGGCGTTATCGAGATAGGCACAACTGAGTTAGTCCCAGAGGACCCTAATCTCATCCAACATGTCAAAACTTGCTTCTTGGAATTCTCAAAGCCCATCTGCTCTGAAAAGCCTTCCTCTCCATTTAACAAAGAAGATGAAGATAAATATCCAACATGCGCCAACATCAATGCTTGGACATCGAATGATTATGATACAACGACTTTGGAAAACCGATGTTCCCCTACCAAGGAACTACAAGATAACAATGAAGAGTTTAACATGGATTCTTCTGAGGAATGTTGTAATGGTTGTGACCATCACTGTCAGGTGGAAGGCTCTATGTTTGAGTGCATCAGTGGTGCACAAGATTCCTTGAGTTCTGGGGATTGTATATCTGAGGCACTTGAGAAGCAAGCCAAGGAAGCTACAAATGCAGATCAAGGTCAGTTAAGACTAACAGAACTTCATGACTGCAATCACTCAAAACTTAGTTCCTTGGGTATTGGAATCGTTGAAGACGTGCACTACACAAGGACTCTCAGTGCTCTTTTGGGAAACGCTATGATGTTTAAAGGACATTCACACGCTAGGAACTCGAATTGGAGGTCGAGTTTTGCACCATGGAATAATGGGAGAGCTGCTGAGAGGGCGAGGCAACAGTTAGACCAGAGCATGTTGAAGAAGATTTTGTTCACTGTCCCTTTGATGCATAACAGATTCTTCTCTTCCAGGTCACCAAAACAACGTGATAGAACAGAATTTCACAGAAAACTGGATATTGATGATCATTGTGTGGGGAAGTCTTTATCTGATGAAAGAAGAGAAAGTGAAAACTATCAGGTGGACAAGATTTCTATCCTCAATGACACGATCAAATACATGAAAGAGCTTGAAGCAAAAGTGGAAGAACTAGAATCTTGCACGGACATTGCAGATTCTGAAACCACAATGAGAAGCTCAGAAGTTATGGAGCAGACATCAGATAACTGTGACATCAGGAGAGTTTTCAAAGCAAGGAAACCTCAGACGAACAAGAGGAAAGCTTGTAACATTGATGAATCCGGCTCAGACTTAAACAGCATAATCATTAAAGAAGGTAAATCATGGGACGTAAAAGTGGACATAAAGGAGAAGGAGGTTGTGATTGAGATGAAATGTCCTTATAGGGAGTTCATATTGCTTGAAATCATGGATGCTATAAGCAACGTGCATTTAGAAGCTCACACAGTTCAATCTTCAACAGTTGATGGATTTCTCGTACTGACACTTAAATCTAAGTTTCGAGGAGCGGCCATTGCACCAACGAGGATGATCTATGAAACACTATGGAAAGTCTGTGACAAAACTTGA 1842 0.4202 MSSGSEKTSTKLRTKLAVAVKSIQWSYGIFWASSSTKQRTLEWNEGYYNGEIKTRKTVQSMMELKADKIRFQRSEQLRELYQFLLVGETDSQAKRPSAALSPEDLTDLEWYYLVCMSFMFNHSQSLPGRALEKGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVPEDPNLIQHVKTCFLEFSKPICSEKPSSPFNKEDEDKYPTCANINAWTSNDYDTTTLENRCSPTKELQDNNEEFNMDSSEECCNGCDHHCQVEGSMFECISGAQDSLSSGDCISEALEKQAKEATNADQGQLRLTELHDCNHSKLSSLGIGIVEDVHYTRTLSALLGNAMMFKGHSHARNSNWRSSFAPWNNGRAAERARQQLDQSMLKKILFTVPLMHNRFFSSRSPKQRDRTEFHRKLDIDDHCVGKSLSDERRESENYQVDKISILNDTIKYMKELEAKVEELESCTDIADSETTMRSSEVMEQTSDNCDIRRVFKARKPQTNKRKACNIDESGSDLNSIIIKEGKSWDVKVDIKEKEVVIEMKCPYREFILLEIMDAISNVHLEAHTVQSSTVDGFLVLTLKSKFRGAAIAPTRMIYETLWKVCDKT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5000g00002 613 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 196 IPR025610 -
Pral5000g00002 613 Coils Coil 451 478 - -
Pral5000g00002 613 PANTHER TRANSCRIPTION FACTOR TT8 4 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5000g00002 Pral-Chr5000 3172 7428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5000g00002 1 610 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.225 5.93e-126 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5000g00002 - - pcin:129290210 1029.24