Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5000g00001 ATGTCCAGTGGAAGTGAGAAAACGTCGACAAAGCTAAGGACTAAGCTTGCTGTTGCGGTAAAGAGCATTCAATGGAGCTACGGCATTTTCTGGGCATCTTCCTCTACCAAGCAACGAACATTGGAATGGAACGAAGGGTACTACAATGGTGAAATCAAGACAAGGAAGACAGTCCAATCCATGATGGAACTAAAGGCTGATAAAATAAGGTTTCAGAGAAGTGAGCAACTAAGAGAACTCTATCAGTTTCTTCTTGTTGGCGAAACGGATTCGCAGGCTAAAAGGCCTTCTGCTGCATTATCTCCAGAGGATCTCACGGACTTAGAGTGGTACTACTTGGTTTGCATGTCCTTTATGTTCAACCACAGCCAAAGTTTGCCTGGAAGAGCACTAGAAAAGGGTGAAACCATCTGGTTATGCAATGCTCAATATGCAGACAGCAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCATCAATTCAGACTGTGGTGTGTTTTCCCTACCTAGGGGGCGTTATCGAGATAGGCACAACTGAGTTAGTCCCAGAGGACCCTAATCTCATCCAACATGTCAAAACTTGCTTCTTGGAATTCTCAAAGCCCATCTGCTCTGAAAAGCCTTCCTCTCCATTTAACAAAGAAGATGAAGATAAATATCCAACATGCGCCAACATCAATGCTTGGACATCGAATGATTATGATACAACGACTTTGGAAAACCGATGTTCCCCTACCAAGGAACTACAAGATAACAATGAAGAGTTTAACATGGATTCTTCTGAGGAATGTTGTAATGGTTGTGACCATCACTGTCAGGTGGAAGGCTCTATGTTTGAGTGCATCAGTGGTGCACAAGATTCCTTGAGTTCTGGGGATTGTATATCTGAGGCACTTGAGAAGCAAGCCAAGGAAGCTACAAATGCAGATCAAGGTCAGTTAAGACTAACAGAACTTCATGACTGCAATCACTCAAAACTTAGTTCCTTGGGTATTGGAATCGTTGAAGACGTGCACTACACAAGGACTCTCAGTGCTCTTTTGGGAAACGCTATGATGTTTAAAGGACATTCACACGCTAGGAACTCGAATTGGAGGTCGAGTTTTGCACCATGGAATAATGGGAGAGCTGCTGAGAGGGCGAGGCAACAGTTAGACCAGAGCATGTTGAAGAAGATTTTGTTCACTGTCCCTTTGATGCATAACAGATTCTTCTCTTCCAGGTCACCAAAACAACGTGATAGAACAGAATTTCACAGAAAACTGGATATTGATGATCATTGTGTGGGGAAGTCTTTATCTGATGAAAGAAGAGAAAGTGAAAACTATCAGGTTCTCAAATCTATGGTCCCTTCTATAGACGAGGTGGACAAGATTTCTATCCTCAATGACACGATCAAATACATGAAAGAGCTTGAAGCAAAAGTGGAAGAACTAGAATCTTGCACGGACATTGCAGATTCTGAAACCACAATGAGAAGCTCAGAAGTTATGGAGCAGACATCAGATAACTGTGACATCAGGAGAGTTTTCAAAGCAAGGAAACCTCAGACGAACAAGAGGAAAGCTTGTAACATTGATGAATCCGGCTCAGACTTAAACAGCATAATCATTAAAGAAGGTAAATCATGGGACGTAAAAGTGGACATAAAGGAGAAGGAGGTTGTGATTGAGATGAAATGTCCTTATAGGGAGTTCATATTGCTTGAAATCATGGATGCTATAAGCAACGTGCATTTAGAAGCTCACACAGTTCAATCTTCAACAGTTGATGGATTTCTCGTACTGACACTTAAATCTAAGTTTCGAGGAGCGGCCATTGCACCAACGAGGATGATCTATGAAACACTATGGAAAGTCTGTGACAAAACTTGA 1875 0.4203 MSSGSEKTSTKLRTKLAVAVKSIQWSYGIFWASSSTKQRTLEWNEGYYNGEIKTRKTVQSMMELKADKIRFQRSEQLRELYQFLLVGETDSQAKRPSAALSPEDLTDLEWYYLVCMSFMFNHSQSLPGRALEKGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVPEDPNLIQHVKTCFLEFSKPICSEKPSSPFNKEDEDKYPTCANINAWTSNDYDTTTLENRCSPTKELQDNNEEFNMDSSEECCNGCDHHCQVEGSMFECISGAQDSLSSGDCISEALEKQAKEATNADQGQLRLTELHDCNHSKLSSLGIGIVEDVHYTRTLSALLGNAMMFKGHSHARNSNWRSSFAPWNNGRAAERARQQLDQSMLKKILFTVPLMHNRFFSSRSPKQRDRTEFHRKLDIDDHCVGKSLSDERRESENYQVLKSMVPSIDEVDKISILNDTIKYMKELEAKVEELESCTDIADSETTMRSSEVMEQTSDNCDIRRVFKARKPQTNKRKACNIDESGSDLNSIIIKEGKSWDVKVDIKEKEVVIEMKCPYREFILLEIMDAISNVHLEAHTVQSSTVDGFLVLTLKSKFRGAAIAPTRMIYETLWKVCDKT 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5000g00001 624 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 440 486 IPR036638 GO:0046983
Pral5000g00001 624 Coils Coil 462 489 - -
Pral5000g00001 624 PANTHER TRANSCRIPTION FACTOR TT8 4 620 - -
Pral5000g00001 624 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 196 IPR025610 -
Pral5000g00001 624 Gene3D - 436 504 IPR036638 GO:0046983
Pral5000g00001 624 SMART finulus 433 478 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5000g00001 Pral-Chr5000 3172 7428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5000g00001 1 621 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.690 3.93e-133 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5000g00001 - - pcin:129290210 1053.51