Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral49g00001 ATGGAAGCCCATTCTTCTCCCTCAACGACGTCGTTTTATCACCAGAAACGTTTCCTGCAGGAGATGGATTTCTTCTCTGACAAAAAAATCAAGACTGATGATTATCAACATGATCATGATGATGATCTGATGATGCTAAACGGGCCCACAGAGCTTCACGCTGATGCGAGTTTAGATCTTGTGACTGTGACGAGCAGTAGCAACAGATCGATGGTGGATGATGGGGCATCATACGCCATGGAAGAGAACAAGAAAAAAGAGTATGTAGCTTTGTTAGCTGAATTGCAGCAGATAAAAGCTGAAAATCAACGTCTGAGAGATTTGCTTGATCAAGTGAACCTAAACTACAATGCCCTGAAATTGAAACTTACCAAGCTCAAGCGGACGCAAAGTAATAATGAGGTAGAAGAAGGCAGTGGAGATCAGATTGAGAGGAAAAGAGGAATGAATATGACAGGGCTATTAGTTGAAGATAGTAATAAAAGTGAAGGCAAATTGAGAGAAAGCAAAAGCAATAATAATATGCTTGATTTGATGGAATGCAAGATTGAGAAGAGCACAAATAATAATGATCATCAGCCACTTAACAAAGGTTATGGGAACGATCATCATAATAGTGATCATACAAAAAGCATTTCATCAGAAACCATATCACTCGTCAGGAAAGCTCGTGTTTCTGTTCGAGCTCGATCTGAGACTCCAATGATAGCAGATGGATGCCAATGGAGAAAATATGGGCAAAAGATGGCAAAAGGAAACCCTTGTCCCCGAGCTTATTATCGTTGTTCCATGGGAACTGCTTGTCCTGTACGAAAACAA 819 0.4054 MEAHSSPSTTSFYHQKRFLQEMDFFSDKKIKTDDYQHDHDDDLMMLNGPTELHADASLDLVTVTSSSNRSMVDDGASYAMEENKKKEYVALLAELQQIKAENQRLRDLLDQVNLNYNALKLKLTKLKRTQSNNEVEEGSGDQIERKRGMNMTGLLVEDSNKSEGKLRESKSNNNMLDLMECKIEKSTNNNDHQPLNKGYGNDHHNSDHTKSISSETISLVRKARVSVRARSETPMIADGCQWRKYGQKMAKGNPCPRAYYRCSMGTACPVRKQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral49g00001 273 MobiDBLite consensus disorder prediction 130 144 - -
Pral49g00001 273 SUPERFAMILY WRKY DNA-binding domain 229 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral49g00001 273 ProSiteProfiles WRKY domain profile. 231 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral49g00001 273 MobiDBLite consensus disorder prediction 187 214 - -
Pral49g00001 273 Gene3D WRKY domain 223 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral49g00001 273 MobiDBLite consensus disorder prediction 130 173 - -
Pral49g00001 273 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 62 273 IPR044810 GO:0003700
Pral49g00001 273 Pfam WRKY DNA -binding domain 238 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral49g00001 273 Coils Coil 78 129 - -
Pral49g00001 273 SMART WRKY_cls 236 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral49g00001 Pral-Chr49 482 8702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral49g00001 21 273 WRKY Transcription Factor Family AT1G62300 39.427 2.27e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral49g00001 WRKY 2.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral49g00001 - - pcin:129303865 301.597