Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4999g00019 ATGTCCAGTGGAAGCGAGAAAACGTCGACAAAGCTAAGGACTAAGCTTGCTGTTGCGGTAAAGAGCATTCAATGGAGCTACGGCATTTTCTGGGCATCTTCCTCTACCAAGCAACGAACATTGGAATGGAACGAAGGGTACTACAATGGTGAAATCAAGACAAGGAAGACAGTCCAATCCATGATGGAACTAAAGGCTGATAAAATAAGGTTTCAGAGAAGTGAGCAACTAAGAGAACTCTATCAGTTTCTTCTTGTTGGCGAAACGGATTCGCAGGCTAAAAGGCCTTCTGCTGCATTATCTCCTGAGGATCTCACGGACTTAGAGTGGTACTACTTGGTTTGCATGTCCTTTATGTTCAACCACAGCCAAAGTTTGCCTGGAAGAGCACTAGAAAAGGGTGAAACCATCTGGTTATGCAATGCTCAATATGCAGACAGCAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCATCAATTCAGACTGTGGTGTGTTTTCCCTACCTAGGGGGCGTTATCGAGATAGGCACAACTGAGTTAGTCCCAGAGGACCCTAATCTCATCCAACATGTCAAAACTTGCTTCTTGGAATTCTCAAAGCCTATCTGCTCTGAAAAGCCTTCCTCTCCATTTAACAAAGAAGATGAAGATAAATATCCAACATGCACCAACGTTGATGCTTGGACATCGAATGATTATAACAACGACTTTGGAAAACCGATGTTCCCCTACCAAGGAACTACAAGATAACTTGAAGAGTTTAACATGGATTCTTCTGAGGAGTGTTGTAATGGTTGTGACCATCACTGTCAGGTGGAAGACTCTATGTTTGAGTGCATCAGTGGTGCACAAGATTCCTTGAGTTCTGGGGATTGTATATCTGAGGCACTTGAGAAGCAAGCCAAGGAAGCTACAAATGCAGATCAAGGTCAGTTAAGACTAACAGAACTTCATGACTGCAATCACTCAAAACTTAGTTCCTTGGGTATTGGAATCGTTGAAGACGTGCACTACACAAGGACTCTCAGTGCTCTTTTGGGAAACTCTATGATGTTTAAAGGACATTCACACACTAGGAACTCGAATTGGAGGTCGAGTTTTGCACCATGGAATAATGGGAGAGCTGCTGAGAGGGCGAGGCAACAGTTAGACCAGAGCATGTTGAAGAAGATTTTGTTCACTGTCCCTTTGATGCATAACAGATTCTTCTCTTCCAGGTCACCAAAACAACGTGATATAACAGAATTTCACAGAAAAATGGACAGTGATGATCATTGTGTGGGGAAGTCTTTATCTGATGAAAGAAGAGAAAGTGAAAACTATCAGGTTCTCAAATCTATGGTCCCTTCTATAGACGAGGTGGACAAGATTTCTATCCTCAATGACACGATCAAATACATGAAAGAGCTTGAAGCAAAAGTGGAAGAACTAGAATCTTGCATGGACATTGCAGATTCTGAAACCACAATGAGAAGCTCAGTAGTTATGGAGCAGACATCAGATAACTGTGACATCAGAAAAGTTTTCAAAGCAAGGAAACCTCAGACGAACAAGAGGAAAGCTTGTAACATTGATGAATCCGGCGCAGACTTAAACAGCATAATCATTAAAGAAGGTAAATCATGGGACGTAAAAGTGGACATAAAGGAGAAGGAGGTTGTGATTGAGATGAAATGTCCTTATAGGGAGTTCATATTGCTTGAAATCATGGATGCTATAAGCAACGTGCATTTAGAAGCTCACACAGTTCAATCTTCAACAGTTGATGGATTTCTCGTACTGACACTTAAATCTAAGTTTCGAGGAGCGGCCATTGCACCAACGAGGATGATCTATGAAACACTATGGAAAGTCTGTGACAAAACTTGA 1872 0.4183 MSSGSEKTSTKLRTKLAVAVKSIQWSYGIFWASSSTKQRTLEWNEGYYNGEIKTRKTVQSMMELKADKIRFQRSEQLRELYQFLLVGETDSQAKRPSAALSPEDLTDLEWYYLVCMSFMFNHSQSLPGRALEKGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVPEDPNLIQHVKTCFLEFSKPICSEKPSSPFNKEDEDKYPTCTNVDAWTSNDYNNDFGKPMFPYQGTTRXLEEFNMDSSEECCNGCDHHCQVEDSMFECISGAQDSLSSGDCISEALEKQAKEATNADQGQLRLTELHDCNHSKLSSLGIGIVEDVHYTRTLSALLGNSMMFKGHSHTRNSNWRSSFAPWNNGRAAERARQQLDQSMLKKILFTVPLMHNRFFSSRSPKQRDITEFHRKMDSDDHCVGKSLSDERRESENYQVLKSMVPSIDEVDKISILNDTIKYMKELEAKVEELESCMDIADSETTMRSSVVMEQTSDNCDIRKVFKARKPQTNKRKACNIDESGADLNSIIIKEGKSWDVKVDIKEKEVVIEMKCPYREFILLEIMDAISNVHLEAHTVQSSTVDGFLVLTLKSKFRGAAIAPTRMIYETLWKVCDKT 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4999g00019 623 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 438 486 IPR036638 GO:0046983
Pral4999g00019 623 SMART finulus 432 477 IPR011598 GO:0046983
Pral4999g00019 623 Coils Coil 461 488 - -
Pral4999g00019 623 PANTHER TRANSCRIPTION FACTOR TT8 4 619 - -
Pral4999g00019 623 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 196 IPR025610 -
Pral4999g00019 623 Gene3D - 435 503 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4999g00019 Pral-Chr4999 81394 85356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4999g00019 1 620 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.560 1.83e-134 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4999g00019 - - pcin:129290210 1038.48