Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4999g00009 ATGGGGATTCAGTGCTCCAGACTCATGCCATGCTGTGCGAATTCTCAAGTAAAGGCTTCCGTTCTTGAAGCTCCAGATACTGAAAAGGAGGATAGAAGTGAGGCCAATAACTGGCCTGCATTCCGTGAATTTTCATTGGAGCAACTAAAGAATGCAACATCTGGCTTTGCTGTTGAGAATATTGTATCTGAACATGGAGAGAAGGCGCCAAATGTTGTTTACAAAGGGAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGCTTTAATAGAAATGCTTGGCCTGATGGCCGGCAGTTTTTGGAGGAAGCAAGATCTGTTGGTGAGCTCCGCAACCAGCGATTAGCAAATTTGATTGGTTGTTGTTGCGAAGGTGATGAGAGGTTGCTTGTAGCAGAATTTATGCCGAATGAGACACTGGCAAAACACCTTTTCCATTGGGAAACACAACCTATGAAATGGGCGATGCGATTAAGAGTTGTTTTCCATCTTGCACAAGCTCTAGAATATTGCACAGGGAAAGGGCGAGCCCTCTATCATGACCTTAATGCATACAGAGTTTTATTTGATGAGGATGGCAATCCCAGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCTTTTACCCCTCCAGAATATCTGAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGCTTCGGAACTCTTCTGCTTGACCTTCTCAGTGGGAAGCATATCCCCCCAAGCCATGCCCTTGATTTGATTCGGGACAGAAATCTTCAAATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGATGATGATGGAACAGAGTTAGTACGCTTGGCATCTCGATGCTTACAGTATGAACCTAGAGAAAGGCCAAATCCTAGATCATTGGTGGCTGCCTTGGCTCCTCTTCAGAAAGATACAGAGGTTTCTTCACATGTCTTGATGGGAATCCCACATGGTGATGCTACTTTTGCTTCGTTGTCCCCACTTGGTGAAGCATGCTCGAGAAAGGATTTGGCTGCTATACATGAAGTTCTGGAAAATATTGGCTACAAAGACGATGAAGGAGTGACAAATGAGTTGTCATTCCAGGTTTGGACTGATGAAATGCAGGAAACACTTAACAGTAAGAAAAAGGGGGATGTTGCTTTCCAGCAGAAGGATTTTAGAGTTGCACTAGAGTGCTACACACAGTTCATTGATGGTGGAATAGTGGTTTCTCCAACCGTCTATGCGCGGCGAAGTTTGTGTTATCTGATTGGTGACATGCCTCAGGAAGCACTGAACGATGCAATGCAGGCACAAGTCGTATCCCCTGTATGGCACATAGCATCATACCTTCAATTTCTTGCCCTCTCTGGACTTGTTATGGAGACTGAAGCTCAAGTAGCACTTAAAGAGGGCACAGCTTTGGAAGCCAAGAGAAGTGAAACCTCTGGGCATAAGTGA 1479 0.4422 MGIQCSRLMPCCANSQVKASVLEAPDTEKEDRSEANNWPAFREFSLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDGRQFLEEARSVGELRNQRLANLIGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVVFHLAQALEYCTGKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPRSLVAALAPLQKDTEVSSHVLMGIPHGDATFASLSPLGEACSRKDLAAIHEVLENIGYKDDEGVTNELSFQVWTDEMQETLNSKKKGDVAFQQKDFRVALECYTQFIDGGIVVSPTVYARRSLCYLIGDMPQEALNDAMQAQVVSPVWHIASYLQFLALSGLVMETEAQVALKEGTALEAKRSETSGHK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4999g00009 492 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Pral4999g00009 492 SUPERFAMILY Protein kinase-like (PK-like) 35 317 IPR011009 -
Pral4999g00009 492 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Pral4999g00009 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Pral4999g00009 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 17 486 IPR045845 GO:0004672|GO:0009742
Pral4999g00009 492 SUPERFAMILY TPR-like 385 487 IPR011990 GO:0005515
Pral4999g00009 492 Gene3D Tetratricopeptide repeat domain 381 491 IPR011990 GO:0005515
Pral4999g00009 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Pral4999g00009 492 FunFam probable serine/threonine-protein kinase At4g35230 381 490 - -
Pral4999g00009 492 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Pral4999g00009 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4999g00009 Pral-Chr4999 35992 42935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4999g00009 20 331 Glycoside Hydrolase AT3G07070 33.235 5.49e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pral4999g00009 PK_Tyr_Ser-Thr 1.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4999g00009 K14500 - gmx:100781311 884.789