Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4999g00007 ATGGATCGGGGGGACCAAATGGCGTTATCTGGGTCTGCATCTTACTATATGCAGAGGGGAATGGCTGGTTCTGCCGGACAGACTGAGCTTCATGGCGCTTCATCTGGAGTGCCATCTGGGGAACCTCTCAAACGGAAGAGAGGAAGGCCTAGGAAATATGGTCCAGATGGAACTGTGTCGTTGGCATTGACTCCGCTGTCGTCTAGTCATCCCGGAAGTGGTCATTCCGGAAGTGGAGCTGCGACACAGAGCCATAAGAGGGGTAGAGGGCGCCCACCAGGGACTGGCAAGAAACAACAGTTGGCTTCTCTTGGTGAATTCATGTCTGGTTCAGCTGGAATGGGTTTCACTCCTCATATCATCACCATTGCAGTTGGAGAAGATATTGTGTCAAAAATAATGGCATTCTCCCAGCAAGGGTCTAGAGCCGTGTGTGTATTGTCAGCCAATGGTGCTGTTTCCAATGCGACCCTCTGTCAGCCTTCAACTTTGGGTGGTTCTGTCACATATGAGGGGCGTTATGAGATATTGTGCCTGTCAGGCTCTTACTTGCTTAATGAAAGTGGTGGCTCGCGCAATCGAACTGGTGGATTGAGTGTCTCTCTTGCTAGTCCTGAGGGTAAAATCATCGGTGGAGGAGTCGGTGGAATGCTTATTGCAGCATGTCCCGTCCAGGTGATAGTTGGGAGCTTTCTATGGGGTGGATCAAAGACCAAGAACAAGAAAAAAGAAGTTGAAGAAGTTCCCGCGGAGTCAGATCATCAGGATCACCAGGCAGTTCATAATCCAGTTGCTATGAATAACATCATGGCCAATCAGAATCTCACCCCACCATCTTCTATCGGTACATGGCCGGCATCTCGAACGATGGACATTCGCAATTCCCATGTTGACATCGATTTAATGCGTGGGTGA 915 0.4973 MDRGDQMALSGSASYYMQRGMAGSAGQTELHGASSGVPSGEPLKRKRGRPRKYGPDGTVSLALTPLSSSHPGSGHSGSGAATQSHKRGRGRPPGTGKKQQLASLGEFMSGSAGMGFTPHIITIAVGEDIVSKIMAFSQQGSRAVCVLSANGAVSNATLCQPSTLGGSVTYEGRYEILCLSGSYLLNESGGSRNRTGGLSVSLASPEGKIIGGGVGGMLIAACPVQVIVGSFLWGGSKTKNKKKEVEEVPAESDHQDHQAVHNPVAMNNIMANQNLTPPSSIGTWPASRTMDIRNSHVDIDLMRG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4999g00007 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 270 IPR039605 GO:0003680
Pral4999g00007 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 233 - -
Pral4999g00007 304 ProSiteProfiles PPC domain profile profile. 112 255 IPR005175 -
Pral4999g00007 304 SMART AT_hook_2 44 56 IPR017956 GO:0003677
Pral4999g00007 304 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Pral4999g00007 304 CDD DUF296 117 231 IPR005175 -
Pral4999g00007 304 FunFam AT-hook motif nuclear-localized protein 1-like 118 248 - -
Pral4999g00007 304 MobiDBLite consensus disorder prediction 61 83 - -
Pral4999g00007 304 Gene3D - 118 256 - -
Pral4999g00007 304 MobiDBLite consensus disorder prediction 22 100 - -
Pral4999g00007 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 231 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4999g00007 Pral-Chr4999 16681 23633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4999g00007 43 304 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 52.416 1.59e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4999g00007 - - qsa:O6P43_017611 384.415