Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4997g00023 ATGCAGTTGCAGCAAGAACCATCAATAAGTCAGATGTTTTCGTCAATCACCTTGTATCGAAGATTCACTCTAAACATAAATCTCGGAAGAGAACTTACAACTCTTGAGATTAGAGATGCCTTGATTCCTTATCTTGAATCCCTTTTTGAAGAATATGGAGACATTTTGATGGATTTCGTGGAAAACTATCCAAACCCTCCTGTCAAGGAAAAGCCTAGAGCGCCAATTTCTATTCCTAGTTCATTGGTGGAATCAAAGAAGACGAAAGCCATGTCTCAAGTTAGTGAGATAGACCGTGCTGGCAAGCTTCGTCCTCATATTGTCTATCTCTTGGAGTTTGGAATGAAAATTGAGCAAATCAAGAGTATTACTCGAAGATTTCCCTCATTTGCCTATTATAGCTTAGAAGGAAAAATCAAACCAGTTGTTGAGTTTCTTTTAGAACTTGGAGTTCCAAAAGAAGATATTCCCATCATTCTCACTAAAAGGCCTCAATTATGTGGTATCAGTCTCTCCGAGAATCTTAAACCCACCATGAAGTTCTTGGAAACCTTTGGTGTAGACAAGCAGCAGTGGGCAAAGGTGATATACAGATTTCCAGCTCTTCTAACTTACAGCAAGCAAAAGGTGAAAACAAGTGTAGATTTCCTCTATGAAATAGGTCTCTCAGAGGAGAACATAGGCAAGATCCTAACTCGCTTCCCCAATATTATCAGTTACAATGTGGAAGACAAGCTAAGACCAACAGCAAATTACTTTCGTTCCTTGGGAGTTGATGTTGGCATTCTTCTATTTCGATGTCCACAAAATTTTGGTCTCAGCATTGAGGCCAATCTAAAGCCTGTAACAGATTTTTTCTTAGAGAGCGGATACACCGTACAGGAAGTTGGGACCATGATTTCAAGATATGGATCATTGTATACATTTAGCTTGGCTGATAATTTGATCCCAAAATGGGAATTCTTTCTGACCATGGACTACCCTAAACCAGAGCTGGTCAAGTTCCCTCAGTTTTTTGGTTACAGTTTGGAAGAGAGGATTAAACCGAGATATGCTCGAATGAAAGAGTGCGGTGTGAAGTTGCTGCTAAACCAGCTTCTGTCTCTGTCAAGCAGCGACTTTGAGGAGGCCTTGAAAAAGAAAATGAAGAAAATGCAGCTTGACCGGGATTCTAGTTGA 1179 0.4012 MQLQQEPSISQMFSSITLYRRFTLNINLGRELTTLEIRDALIPYLESLFEEYGDILMDFVENYPNPPVKEKPRAPISIPSSLVESKKTKAMSQVSEIDRAGKLRPHIVYLLEFGMKIEQIKSITRRFPSFAYYSLEGKIKPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPTMKFLETFGVDKQQWAKVIYRFPALLTYSKQKVKTSVDFLYEIGLSEENIGKILTRFPNIISYNVEDKLRPTANYFRSLGVDVGILLFRCPQNFGLSIEANLKPVTDFFLESGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFLTMDYPKPELVKFPQFFGYSLEERIKPRYARMKECGVKLLLNQLLSLSSSDFEEALKKKMKKMQLDRDSS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4997g00023 392 PANTHER CGI-12 PROTEIN-RELATED 105 379 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 85 116 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 157 188 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 329 360 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 193 223 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 Pfam mTERF 109 288 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 Pfam mTERF 219 375 IPR003690 GO:0003690|GO:0006355
Pral4997g00023 392 Gene3D Transcription termination factor 3, mitochondrial 159 384 IPR038538 -
Pral4997g00023 392 FunFam Transcription termination factor MTERF5 chloroplastic 164 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4997g00023 Pral-Chr4997 114856 118108 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4997g00023 mTERF 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4997g00023 K15031 - qsa:O6P43_004791 585.489