Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4997g00022 ATGGAGATTCCTTATCTAAATCGCCTGGCCCAGCATTCCTCTTGGACAAGAGTATACACTAGCAAGAGGAGTCAACCTCATCATATTGCAAGGGTTTTCTTTTGCCAAGCGAAGAATGATCGGTCATTAAAATTGGTGCCTCCAACCCTGTTAGCAGCAGAAAAGGAAGAAGCAAAGGCTGTATTAACCTTGTTTTTGAAGAAACAAGGCTTGAGTAATGCAGTTGCAGCAAGAACCATCAATAAGTCAGATGTTTTCGTCAATCACCTTGTATCGAAGATTCACTCTAAACATAAATCTCGGTACCTAGTAGGAAGAGAACTTACAACTCTTGAGATTAGAGATGCCTTGATTCCTTATCTTGAATCCCTTTTTGAAGAATATGGAGACATTTTGATGGATTTCGTGGAAAACTATCCAAACCCTCCTGTCAAGGAAAAGCCTAGAGCGCCAATTTCTATTCCTAGTTCATTGGTGGAATCAAAGAAGACGAAAGCCATGTCTCAAGTTAGTGAGATAGACCGTGCTGGCAAGCTTCGTCCTCATATTGTCTATCTCTTGGAGTTTGGAATGAAAATTGAGCAAATCAAGAGTATTACTCGAAGATTTCCCTCATTTGCCTATTATAGCTTAGAAGGAAAAATCAAACCAGTTGTTGAGTTTCTTTTAGAACTTGGAGTTCCAAAAGAAGATATTCCCATCATTCTCACTAAAAGGCCTCAATTATGTGGTATCAGTCTCTCCGAGAATCTTAAACCCACCATGAAGTTCTTGGAAACCTTTGGTGTAGACAAGCAGCAGTGGGCAAAGGTGATATACAGATTTCCAGCTCTTCTAACTTACAGCAAGCAAAAGGTGAAAACAAGTGTAGATTTCCTCTATGAAATAGGTCTCTCAGAGGAGAACATAGGCAAGATCCTAACTCGCTTCCCCAATATTATCAGTTACAATGTGGAAGACAAGCTAAGACCAACAGCAAATTACTTTCGTTCCTTGGGAGTTGATGTTGGCATTCTTCTATTTCGATGTCCACAAAATTTTGGTCTCAGCATTGAGGCCAATCTAAAGCCTGTAACAGATTTTTTCTTAGAGAGCGGATACACCGTACAGGAAGTTGGGACCATGATTTCAAGATATGGATCATTGTATACATTTAGCTTGGCTGATAATTTGATCCCAAAATGGGAATTCTTTCTGACCATGGACTACCCTAAACCAGAGCTGGTCAAGTTCCCTCAGTTTTTTGGTTACAGTTTGGAAGAGAGGATTAAACCGAGATATGCTCGAATGAAAGAGTGCGGTGTGAAGTTGCTGCTAAACCAGCTTCTGTCTCTGTCAAGCAGCGACTTTGAGGAGGCCTTGAAAAAGAAAATGAAGAAAATGCAGCTTGACCGGGATTCTAGTTGA 1407 0.4051 MEIPYLNRLAQHSSWTRVYTSKRSQPHHIARVFFCQAKNDRSLKLVPPTLLAAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDVFVNHLVSKIHSKHKSRYLVGRELTTLEIRDALIPYLESLFEEYGDILMDFVENYPNPPVKEKPRAPISIPSSLVESKKTKAMSQVSEIDRAGKLRPHIVYLLEFGMKIEQIKSITRRFPSFAYYSLEGKIKPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPTMKFLETFGVDKQQWAKVIYRFPALLTYSKQKVKTSVDFLYEIGLSEENIGKILTRFPNIISYNVEDKLRPTANYFRSLGVDVGILLFRCPQNFGLSIEANLKPVTDFFLESGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFLTMDYPKPELVKFPQFFGYSLEERIKPRYARMKECGVKLLLNQLLSLSSSDFEEALKKKMKKMQLDRDSS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4997g00022 468 FunFam Transcription termination factor MTERF5 chloroplastic 240 460 - -
Pral4997g00022 468 Gene3D Transcription termination factor 3, mitochondrial 235 460 IPR038538 -
Pral4997g00022 468 PANTHER CGI-12 PROTEIN-RELATED 157 455 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 269 299 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 SMART mt_12 373 404 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 Pfam mTERF 292 451 IPR003690 GO:0003690|GO:0006355
Pral4997g00022 468 Pfam mTERF 185 356 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4997g00022 Pral-Chr4997 114855 118108 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4997g00022 mTERF 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4997g00022 K15031 - qsa:O6P43_004791 692.575