Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4996g00101 ATGAATATGATGCGACGGCTGAAGAGCATTGCTTCTGGGCGGACCTCCATTTCGTCGGATCCTGGAGGGGATTCTAACACCAAGAGAGCTAAGTTTGATCAAGAAACTGATGGAAGAGTCAATGAGGAAGCAAATCCTGTTGAGAGAGGCAGCACACATATGGAGCAGCATGTTTGTGCGCCAGGGGCTAGAACAGAGAGATCAGGTTATGATCAGCTTCCTAAAGAATTGAATGAAATGAAAATTAGAGATGAGAAAGGCAACAACCGTAACGAAAAGGATATGGAGCCAAGTATTGTGAATGGTAATGGAACTGAAACAGGACAGGTAATTACTACAGCCATTGGTGGTCGTGATGGACAACCAAAGCAGACCATATCATACATGGCAGAACGTGTGGTTGGTACTGGTTCCTTTGGTGTTGTTTTTCAGGCTAGGTGCCTTGAAACAGGTGAAACAGTTGCCATAAAGAAGGTTTTGCAAGACAAGAGATATAAGAATAGGGAACTACAGGTTATGCGGATGCTTGACCATCCCAATGTTATTCAACTAAAGCACTGTTTCTTTTCAACTACTGAAAAGGATGAGTTGTACCTGAACCTGGTTTTGGAGTATGTATCAGAAACCGTCTACAGAGTTTCAAAGCACTACATCAGAATGCATCAGCATATGCCTATAATTTATATACAACTCTATACATACCAGATATGCCGTGCATTAAACTATCTACACCATGTACTTGGCGTCTGCCACCGTGACATCAAACCACAGAATTTACTGGTTAATCCCCATACTCATCAGCTAAAGATCTGTGATTTTGGAAGTGCAAAGATGCTGGTGCCTGGTGAACCCAACATATCATATATATGCTCACGGTATTATAGAGCACCTGAACTCATATTTGGGGCTACTGAATATACAAATGCTATTGATATGTGGTCCGTTGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGCCAATGTTCCCGGGGGAGAGTGGAGTTGATCAGTTGGTGGAAATCATCAAGATATTGGGGACACCGACTAGAGAAGAGATAAAGTGCATGAATCCGAATTACTCTGAATTCAAGTTTCCTCAGATTAAAGCACACCCATGGCACAAGGTTTTTCACAAGAGAATGCCTTCAGAAGCTGTTGATCTTGTATCAAGGCTACTCCAGTATTCACCAAATCTACGGTGCACTGCTTTGGAAGCATGTGCACACCCCTTCTTCAATGATCTAAGAGACCCAAATGTATGCTTGCCGAACGGGCGACCTCTGCCTCCTTTGTTTGACTTTACAGCACAAGAGTTGGCTGGTGCACCTGCTGAATTGCGTCATCGTCTTATTCCCGAACATGCAAGGAGTTGA 1374 0.4345 MNMMRRLKSIASGRTSISSDPGGDSNTKRAKFDQETDGRVNEEANPVERGSTHMEQHVCAPGARTERSGYDQLPKELNEMKIRDEKGNNRNEKDMEPSIVNGNGTETGQVITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELQVMRMLDHPNVIQLKHCFFSTTEKDELYLNLVLEYVSETVYRVSKHYIRMHQHMPIIYIQLYTYQICRALNYLHHVLGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSVGCVLAELLLGQPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYSEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCTALEACAHPFFNDLRDPNVCLPNGRPLPPLFDFTAQELAGAPAELRHRLIPEHARS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4996g00101 457 Gene3D Transferase(Phosphotransferase) domain 1 208 456 - -
Pral4996g00101 457 MobiDBLite consensus disorder prediction 84 106 - -
Pral4996g00101 457 Gene3D Phosphorylase Kinase; domain 1 113 207 - -
Pral4996g00101 457 SMART serkin_6 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4996g00101 457 MobiDBLite consensus disorder prediction 9 25 - -
Pral4996g00101 457 ProSitePatterns Protein kinases ATP-binding region signature. 134 158 IPR017441 GO:0005524
Pral4996g00101 457 FunFam Shaggy-related protein kinase kappa 208 456 - -
Pral4996g00101 457 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 92 456 - -
Pral4996g00101 457 CDD STKc_GSK3 123 415 IPR039192 -
Pral4996g00101 457 Pfam Protein kinase domain 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4996g00101 457 FunFam Glycogen synthase kinase-3 beta 112 207 - -
Pral4996g00101 457 MobiDBLite consensus disorder prediction 26 50 - -
Pral4996g00101 457 ProSiteProfiles Protein kinase domain profile. 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4996g00101 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Pral4996g00101 457 MobiDBLite consensus disorder prediction 1 55 - -
Pral4996g00101 457 SUPERFAMILY Protein kinase-like (PK-like) 127 437 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4996g00101 Pral-Chr4996 363320 368503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4996g00101 134 415 Core Cell Cycle Gene Families AT1G76540 36.610 5.84e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pral4996g00101 Pkinase 2.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4996g00101 K27414 - qsa:O6P43_017567 835.099