Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4996g00099 ATGTTAAGTACAACCTCGTTGCCGTCAGCTCTGCCAGATTCCGCCGTAGACCCCTCTCCCCTTCTTCCTTACTCCGTCTCCGATCAAGTGCTCCGACGGACGTCGGGGCCGTTACGGAGCGCGGCGCGGTTCTTCCGGCATGCTAGCGGGCGGCGGATGATGCTCCGGGAGACGTCGGTGCGAGTGCGGGAGAACGCGGCGGAGCAGCTGGAAGCGCGTCAGAGTAACTGGGCGTTCTCGAAGCCGGTGGTGATCCTGGATGTCGTTTGGAACTTGGCGTTTGTGATTAGCGGGATTGTCGTTTTGGGGCTGAGCGTTGAGGAGAAGCCTTCGGTGCCTTTGAGGGTGTGGATTTGTGGGTACTTGCTTCAAGGTGCGTTTCATTGTGTGCGTGTGACTCTTAGGTATAGACGATACATGCAAGCCCAAGCTCGTTCTGCGTCCGAAGAACGGTATGAGAATGGGATTTCTTGGGAAAGAGGTGTAGATTTTAATTCTAGTTCTGGGAGTGATATTGGCGATGCAAATGATTCAGCTGACGGACAGGATCAGGACGGATATAGCATCAGAAAGCGCATGGAATCTGTAAATACCATGTTCTCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACTACAGGAGGCCAGAGCTTGACCCAAGATGCCCCTCTGCTTTACTGGCTTTGTATTACCTTCCTTGCTGTCGACATTGTAATTGTTTTGCTCTGCGTGGTTGTGGCATGCCTGGTTGGTATTGCTGTTTGCTGCTGTCTTCCATGCATACTTGCATTTTTGTCAGCGGTGGCGGATAAGGAAGGGGCAACCAAGGAAGAAATCAATCGGTTGCCGCAATACAAGTTCAGGAGAACTGATGAACATAAGCCTAATGTTGATGGTGATGATGCCGAAGCTTCATCTTGTAAAGGAATAATGACAGAATGTGACAGCGATTCACCAGCAGAACACGTTCTTCCCACGGAAGATGCAGAGTGCTGCATCTGCCTGTGTCCCTATGAGGATGGGGCTGAGCTAAGAGAACTTCCCTGTACCCACCATTTCCACACGGACTGCATCGACAAGTGGTTGTACATCAACGCCAACTGCCCTCTCTGCAAGTTCAATGTTCATACTGGAAACCATTCGCAAGTTTGA 1155 0.5082 MLSTTSLPSALPDSAVDPSPLLPYSVSDQVLRRTSGPLRSAARFFRHASGRRMMLRETSVRVRENAAEQLEARQSNWAFSKPVVILDVVWNLAFVISGIVVLGLSVEEKPSVPLRVWICGYLLQGAFHCVRVTLRYRRYMQAQARSASEERYENGISWERGVDFNSSSGSDIGDANDSADGQDQDGYSIRKRMESVNTMFSFIWWLLGFYWITTGGQSLTQDAPLLYWLCITFLAVDIVIVLLCVVVACLVGIAVCCCLPCILAFLSAVADKEGATKEEINRLPQYKFRRTDEHKPNVDGDDAEASSCKGIMTECDSDSPAEHVLPTEDAECCICLCPYEDGAELRELPCTHHFHTDCIDKWLYINANCPLCKFNVHTGNHSQV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4996g00099 384 PANTHER TARGET OF ERK KINASE MPK-1 49 379 - -
Pral4996g00099 384 ProSiteProfiles Zinc finger RING-type profile. 332 373 IPR001841 -
Pral4996g00099 384 SUPERFAMILY RING/U-box 325 378 - -
Pral4996g00099 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 310 379 IPR013083 -
Pral4996g00099 384 CDD RING-H2_EL5-like 331 372 - -
Pral4996g00099 384 SMART ring_2 332 372 IPR001841 -
Pral4996g00099 384 Pfam Ring finger domain 331 373 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4996g00099 Pral-Chr4996 358142 361478 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4996g00099 27 383 C3H Transcription Factor Family AT1G68070 45.455 3.71e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4996g00099 - - qsa:O6P43_027190 439.884