Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4996g00096 ATGCTTCTGCACCAACACTCTTTTCCTTTTGACTTTGAATTTTCCACAACTTCTTTGCATATGTTAAGTACAACCTCGTTGCCGTCAGCTCTGCCCGATTCCGCCGTAGAGCCCTCCCCCCTTCTTCGTTACTCCGTCTCCGATCAAGAACTCCGACGGACGTCGGGGCCGTTATGGAGCGCCGCGAGGTTCTTCGGGCATGCTAGCGGGCGGCGGATGATGCTCCGGGAGACGTCGGTGCGGGTGCGAGAGAACGCGGCGGAGCAGCTGGAAGCGCGTCAGAGTAACTGGGCGTTCTCGAAGCCGGTGGTGATCCTGGATGTCGTTTGGAACTTGGCGTTTGTGATTAGCGGGATTGTCGTTTTGGGGCTGAGCGTTGAGGAGAAGCCTTCGGTGCCTTTGAGGGTGTGGATTTGTGGGTACTTGCTTCAAGATGCGTTTCATTGTGTGCGTGTGACTCTTAAGTATAGACGATACATGCAAGCCCAAGCTCGTTCTGCGTCCGAAGAACGGTATGAGAATGGGATTTCTTGGGAAAGAGGTGTAGATTTTAATTCTAGTTCTGGGAGTGATATTGGCGATGCAAATGATTCAGCTGACGAACAGGATCAGGACGGATATAGCATCAGGAAGCGCATGGAATCTGTAAATACCATGTTCTCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACTACAGGAGGCCAGAGCTTGACCCAAGATGCCCCTCTGCTTTACTGGCTTTGTATTACCTTCCTTGCTATCGACATTGTAATTGTTTTGATCTGCGTGGTTGTGGCATGCCTGGTTGGTATTGCTGTTTGCTTCTGTCTTCCATGCATACTTGCATTTTTGTCAGCGGTGGCGGATAAGGAAGGGGCAACCAAGGAAGAAATCAATCGGTTGCCGAAATACAAGTTCAGGAGAGCTGATGAAAATAAGCCTAATGTTGATGGTGATGATGCCGAAGCTTCATCTTGTAAAGGAATAATGACAGAATGTGACAGCGATTCACCAGCAGAACACGTTCTTCCCACAGAAGATTCAGAGTGCTGCATCTGCCTGTGTCCCTATGAGGATGGGGCTGAGCTAAGAGAACTTCCCTGTACCCACCATTTCCACACGGACTGCATCGACAAGTGGTTGTACATCAACGCCAACTGCCCTCTCTGCAAATTCAATGTTCATACTGGAGACCATTCGCAAGTTTGA 1215 0.4938 MLLHQHSFPFDFEFSTTSLHMLSTTSLPSALPDSAVEPSPLLRYSVSDQELRRTSGPLWSAARFFGHASGRRMMLRETSVRVRENAAEQLEARQSNWAFSKPVVILDVVWNLAFVISGIVVLGLSVEEKPSVPLRVWICGYLLQDAFHCVRVTLKYRRYMQAQARSASEERYENGISWERGVDFNSSSGSDIGDANDSADEQDQDGYSIRKRMESVNTMFSFIWWLLGFYWITTGGQSLTQDAPLLYWLCITFLAIDIVIVLICVVVACLVGIAVCFCLPCILAFLSAVADKEGATKEEINRLPKYKFRRADENKPNVDGDDAEASSCKGIMTECDSDSPAEHVLPTEDSECCICLCPYEDGAELRELPCTHHFHTDCIDKWLYINANCPLCKFNVHTGDHSQV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4996g00096 404 PANTHER TARGET OF ERK KINASE MPK-1 72 398 - -
Pral4996g00096 404 Pfam Ring finger domain 351 393 IPR001841 -
Pral4996g00096 404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 326 399 IPR013083 -
Pral4996g00096 404 ProSiteProfiles Zinc finger RING-type profile. 352 393 IPR001841 -
Pral4996g00096 404 CDD RING-H2_EL5-like 351 392 - -
Pral4996g00096 404 SUPERFAMILY RING/U-box 345 398 - -
Pral4996g00096 404 SMART ring_2 352 392 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4996g00096 Pral-Chr4996 349867 352945 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4996g00096 32 403 C3H Transcription Factor Family AT1G68070 44.000 1.48e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4996g00096 - - qsa:O6P43_027190 434.876