Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4996g00075 ATGGATAACCATGGCTCTTCAGCTCCATACCGGTACCCCGGCCACTATGGGTACCCTTTATATCGCCCACGTTCAGGTTTAGAACCATATTCACTTCCTCCTCGCTACGCATATCCTTCACAACCCTTCAGCTGTGCCTACTATCATCATCCTGCTCGTCCTCCCGGCGCTCCCACTTCACCACAACCATCATCCCCTCCTTCTGGTTCTGCAGAGCATATACGACCGCCTCCTGTTGGCTATTACTTTCCTCATCCTTACCCTTACCCTCATTATCAAGTTCCTCAACCTCCCCAAAATGTTACTTCTCCTCAAACTTCCATTTTGTCCCCTTGTAATTTTCAGTTCGTTCCACCTAGTTACCGTTATTTTCCTGTGGTTGAGGCACATCCACCTCCTGACGAAAAGATCAAAAGTCATTCACGAGCCCGTTCCTACGCTGGTCCATATGAGTCGTCGTGCGAGAGCTCGCCAGGAGGTGGAGCGTCGTCGTGGCAAACCAATGATTCTTCCCACACCCCTGGCATGTCAGTTTACCCCCTATCTTTTGATGGTACTGTGAGCAGTGCTCCATTTCCCAATGTCGGGCAATCTTCTCCAACTAAATCCTCAGTCCAGCTGCCGTTCAGGCATTCGAACTCTGTTTCGATTTCGAGCCTTGAAGGGGAATTTCCCGGCCATCGTCGGAACTCATTCTCGGGGTGGGGATCCACCCACTATAATCAGTTAGATTCTCGTTCTTCGGGATTTCAAGATCATCCGGGGTCGTTAAATGAAAGCATGCGGACTCAGAATCTGGATATTGTTCCTGCCTCGACTAAAGGGCCCTTGAAAACATTGCTCCTGCATGGGAATTTAGACATGTGGGTTCATGAAGCGAGAAATCTTCCGAATATAGATTACTTCCACAAGACGTTTACGGGGATGTTGTGTAAATTCCCTGGGAACGTGGAAGGAAAGATTACTAGTAATCCTTATGTGATAATATCAGTATCAAATGCCATAATTGGAAGGACTTTTGTAATTAACAACTGTGAAAATCCTAATTGGATGCAACATTTTAATGTTCCCGTTGCTCATTATGCTGCTGAAGTGAACTTTCTGGTGAAAGACAATGATGTTGTGGGTTCACAAATTATAGGCAATGTGGCGATTCCGGTTGAACAAATCTACTCAGGTGCAAAAGTAGAAGGTACTTACCCTGTCCTGAATTCTTACGGGAGGCCTTATAAGCAGGGTGCTACCTTGACCCTATCCATTCAGTACATTCCAATTGAGAAGCTAAGCCATCATTATCAAGGAATCGATTCAATGCCTGACTGCACTGGCGTTCCTGGCACATATTTTCCTCTCAGGAAAGGTGGATCTGTCAATCTGTACCAGGATGCCCATGTTCCAGACGGTTTACTACCTCTCGTGATGCTTGACCGAGGGAAATATCATGTTAATGGAAAGTGTTGGGCTGATATGTTTAACGCCATACAGCAAGCCCGGCGTTTGATTTATATTACAGGGTGGTCGCTGTGGCATAAAGTTAGGTTGGTAAGGGATGCTGTTTATCAATTTGATTACACCCTCGGTGATCTTCTGAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTATCTGGGATGACCCGACGTCAAGGAAAATTTTGGGTTACAAAACAGATGGTTTAATGGCAACTCATGATGAGGAAACCCGTAGATTTTTCAAACATTCTTCTGTAAAAGTGCTTCTTTGTCCCCGGATCGCAGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACCATATACACACATCATCAGAAAACTGTTGTCGTGGATGCTGATGCTGGAAATAACAAAAGAAAAATCATTGCGTTCGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATTTCCCCCACCATCCCCTCTTTAGGACTCGCCATTCACTGCATAAGGATGACTATCACAACCCCACTTTTACGGGTAACACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGACGGTCCAGCAGCTTATGATGTTCTGACCAACTTTGAGGAGCGGTGGTTAAAAGCTACAAAGCCTCAAGGGATTAAAAAGTTGAAAGCTTCTTACGATGATGCTTTGCTTAAGCTGGAAAGACTTCCAGAAATTGTTAGCTTAGCTGATATGGCTGTAGATGATGATGATCCCGATTCTTGGCATGTTCAGATATTTCGGTCGATCGATTCAAATTCTGTTAAGGGATTTCCAAAAGATCCCAAAAATGCAACAAAGAAGAACCTAGTCTGTGGGAAGAATGTATTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGTGCTGCTCAGCATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCGTACAATTGGAGTCAATATAAAGACCTAGGTGCTAATAACTTGATTCCAATGGAAATTGCCCTTAAGATTGTGGAAAAGATAAAGGCAAATGAGAGATTTGCAGTGTATATTATTATACCAATGTGGCCGGAGGGTGTTCCATCCGGGTCTGCCACACAGAGGATTCTATTTTGGCAGCAAAAGACAATGCAAATGATGTATGAAACAGTTTCAAAGGCTTTGGTTGAGGCTGGGCTGGAAGCAGCATTCGCTCCACAGGATTATTTAAACTTCTTTTGTCTCGGAAATCGGGAAATCATAGATATGTATGATTATAGTAGTATGCTTGGAACTCCTCCTCCAGCAAATAGTCCTCAAGCATTTAGTCGAAATAGCCGTCGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATACGTAATATTGGGGTCTGCAAACATCAATCAACGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTAATTATACGTGGGCAAGACAACGTTCTTATCCATGTGGTGAGGTCCATGGATATAGGATGTCACTTTGGGCTGAACACACAGGAACACTTGAAGAGTGCTTCTTACGGCCGGAGAGCCTTGAATGTGTAAGAAGGATTAGAACAATGGGTGAAATTAACTGGAAGCAATTTGCAGCGAATGAAATAACAGAGATGAGAGGGCACCTTCTCAAATACCCGGTTGAAGTTGATCGGAATGGTAAGGTTAGATCCCTTCCTGGCCATGAAGAATTCCCCGATGTGGGAGGAAGGATAGTTGGATCATTCCTTGCCATCCAAGAGAATCTAACCATTTGA 3270 0.441 MDNHGSSAPYRYPGHYGYPLYRPRSGLEPYSLPPRYAYPSQPFSCAYYHHPARPPGAPTSPQPSSPPSGSAEHIRPPPVGYYFPHPYPYPHYQVPQPPQNVTSPQTSILSPCNFQFVPPSYRYFPVVEAHPPPDEKIKSHSRARSYAGPYESSCESSPGGGASSWQTNDSSHTPGMSVYPLSFDGTVSSAPFPNVGQSSPTKSSVQLPFRHSNSVSISSLEGEFPGHRRNSFSGWGSTHYNQLDSRSSGFQDHPGSLNESMRTQNLDIVPASTKGPLKTLLLHGNLDMWVHEARNLPNIDYFHKTFTGMLCKFPGNVEGKITSNPYVIISVSNAIIGRTFVINNCENPNWMQHFNVPVAHYAAEVNFLVKDNDVVGSQIIGNVAIPVEQIYSGAKVEGTYPVLNSYGRPYKQGATLTLSIQYIPIEKLSHHYQGIDSMPDCTGVPGTYFPLRKGGSVNLYQDAHVPDGLLPLVMLDRGKYHVNGKCWADMFNAIQQARRLIYITGWSLWHKVRLVRDAVYQFDYTLGDLLRSKSQEGVRVLLLIWDDPTSRKILGYKTDGLMATHDEETRRFFKHSSVKVLLCPRIAGKRHSWYKQKEVGTIYTHHQKTVVVDADAGNNKRKIIAFVGGLDLCDGRYDFPHHPLFRTRHSLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKATKPQGIKKLKASYDDALLKLERLPEIVSLADMAVDDDDPDSWHVQIFRSIDSNSVKGFPKDPKNATKKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQYKDLGANNLIPMEIALKIVEKIKANERFAVYIIIPMWPEGVPSGSATQRILFWQQKTMQMMYETVSKALVEAGLEAAFAPQDYLNFFCLGNREIIDMYDYSSMLGTPPPANSPQAFSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPNYTWARQRSYPCGEVHGYRMSLWAEHTGTLEECFLRPESLECVRRIRTMGEINWKQFAANEITEMRGHLLKYPVEVDRNGKVRSLPGHEEFPDVGGRIVGSFLAIQENLTI 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4996g00075 1089 PANTHER PHOSPHOLIPASE D 277 1080 IPR015679 -
Pral4996g00075 1089 Pfam Phospholipase D C terminal 1009 1079 IPR024632 -
Pral4996g00075 1089 FunFam Phospholipase D delta 477 715 - -
Pral4996g00075 1089 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 601 636 IPR001736 GO:0003824
Pral4996g00075 1089 CDD C2_plant_PLD 278 423 - -
Pral4996g00075 1089 SUPERFAMILY Phospholipase D/nuclease 733 1021 - -
Pral4996g00075 1089 Pfam Phospholipase D Active site motif 602 636 IPR001736 GO:0003824
Pral4996g00075 1089 Pfam Phospholipase D Active site motif 936 962 IPR001736 GO:0003824
Pral4996g00075 1089 ProSiteProfiles C2 domain profile. 262 400 IPR000008 -
Pral4996g00075 1089 MobiDBLite consensus disorder prediction 150 177 - -
Pral4996g00075 1089 SMART pld_4 601 636 IPR001736 GO:0003824
Pral4996g00075 1089 SMART pld_4 935 962 IPR001736 GO:0003824
Pral4996g00075 1089 MobiDBLite consensus disorder prediction 51 75 - -
Pral4996g00075 1089 MobiDBLite consensus disorder prediction 54 75 - -
Pral4996g00075 1089 SMART C2_3c 285 399 IPR000008 -
Pral4996g00075 1089 Gene3D Endonuclease Chain A 478 720 - -
Pral4996g00075 1089 MobiDBLite consensus disorder prediction 131 177 - -
Pral4996g00075 1089 Pfam C2 domain 284 402 IPR000008 -
Pral4996g00075 1089 FunFam Phospholipase D 748 981 - -
Pral4996g00075 1089 Gene3D Endonuclease Chain A 743 988 - -
Pral4996g00075 1089 SUPERFAMILY Phospholipase D/nuclease 444 701 - -
Pral4996g00075 1089 Gene3D C2 domain 280 419 IPR035892 -
Pral4996g00075 1089 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 935 962 IPR001736 GO:0003824
Pral4996g00075 1089 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 425 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4996g00075 Pral-Chr4996 237119 244853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4996g00075 60 1089 Phospholipase D Gene Family (Wang group) AT2G42010 63.577 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4996g00075 K01115 - gmx:100801286 1489.55