Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4996g00052 ATGGGGTTTGATACTAATCGAGTAGACGAATCAACTCAAAACATCTTATCAATTCCTAATATCAAAGTGTTGGTTGTGGAGGGAGACTCAGCTTGTCTAGCAGTTACATCCAAAATTCTCCATTCCCTTGGATATGAAGGTGTAATTGCTGCACAAGGATCCAGTGCGTTATCCATTGTTGAGCAAATGAAGAACAAGCTTCACTTTGTGCTCATGGAGGTTCATTTGCCTGACATGGGAAGACATGAGATCATCAAGAAAATGAGAGAAGCCTGCAGTTTGCCATTTTTCATTATGTCAGCTGATGCTAAGCACATTCCAGTTGTGGGAGCATCCGCTGAAGGGGCTGAACATCATTTCATAAAGCCGGTTATGGTTGCTGATTTAAGGGGCCTATGGCAGTTTACTGCAAGGAGGGACAAAACTGATAAAGCAATGGAGGTGGATAAATCAAAGGGCAATAAAAATATACCAGACAAGGGCATAAGACTCCAACCATGCTTGGAAACAGGGAATCGGAGCCTCCAGCGTGCAAAAAGGAAAGAGCCAGAACCGCTTGACAAAGCTGAAGAGGGAGAAACCATTGAACTGAAAAGGCAAAAGTTGACATGGGCTTTCAATCTGCATCACAAGTTCATGGAATCCATCGGATTATTAGGAGTCTCTGCTTGTCCAAAGAAAATACTGGAACATCTGAACGTGCCAGGTCTTATAAAAGACGCAGTTTCAAGTTATTTTCAGAAGTTTCATCTCTCTTTGAAACAAGAAGAGAAAGAAACCAAGGATTCATTTTATTTACATCAACGATCAGGACACCTGTCTCAGACAAATTACCTGCAAGTATCGGAGCAGCAATATGCGACCCATCAAACTGACTCCTTCAGCAACTGTGCAAATGATCCCATTAGTTTTGCATACATGCATTGTCCTGATGCTTCAAATTTTCTTCCCCAGGAAATTTGGACCTGCCAAGAGTCAAATTATGGGCAAAATCAATTGACCCCTGGTTGCAATAATGCACAAGACATTCTCATGCTCACTAATACTGCCCCAAGCGAGAAGGAATATGCAGGTTCAAGCCGTGTTGAAAGTGGTGAAGGAATTTTCGAAAGTGACTCATTTCTCTCCCATTTTGGTTATAATGATGAAGGAAATGAAATGCTTTACTCAACAATGCTAGCTAGTTACATGGACCAACTTCTCCTGAAACCACTGCTCCCATTTCCTCTCCCGCCATTTATGGTCGAAGAATATGGGATGTTAGAGGACATCCATGGCCTTATAGATTTTCCAAAAGGAGCTGACCAGTTCAGTGACGATGAGGACTTCAAGCTCTGGTTATCAACTTTATAA 1353 0.4198 MGFDTNRVDESTQNILSIPNIKVLVVEGDSACLAVTSKILHSLGYEGVIAAQGSSALSIVEQMKNKLHFVLMEVHLPDMGRHEIIKKMREACSLPFFIMSADAKHIPVVGASAEGAEHHFIKPVMVADLRGLWQFTARRDKTDKAMEVDKSKGNKNIPDKGIRLQPCLETGNRSLQRAKRKEPEPLDKAEEGETIELKRQKLTWAFNLHHKFMESIGLLGVSACPKKILEHLNVPGLIKDAVSSYFQKFHLSLKQEEKETKDSFYLHQRSGHLSQTNYLQVSEQQYATHQTDSFSNCANDPISFAYMHCPDASNFLPQEIWTCQESNYGQNQLTPGCNNAQDILMLTNTAPSEKEYAGSSRVESGEGIFESDSFLSHFGYNDEGNEMLYSTMLASYMDQLLLKPLLPFPLPPFMVEEYGMLEDIHGLIDFPKGADQFSDDEDFKLWLSTL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4996g00052 450 MobiDBLite consensus disorder prediction 172 192 - -
Pral4996g00052 450 MobiDBLite consensus disorder prediction 144 163 - -
Pral4996g00052 450 SUPERFAMILY CheY-like 19 139 IPR011006 -
Pral4996g00052 450 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 287 IPR045279 GO:0009736
Pral4996g00052 450 SMART REC_2 21 133 IPR001789 GO:0000160
Pral4996g00052 450 NCBIfam myb-like DNA-binding domain, SHAQKYF class 200 251 IPR006447 GO:0003677
Pral4996g00052 450 Gene3D - 13 145 - -
Pral4996g00052 450 Gene3D - 197 255 - -
Pral4996g00052 450 SUPERFAMILY Homeodomain-like 197 254 IPR009057 -
Pral4996g00052 450 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
Pral4996g00052 450 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Pral4996g00052 450 MobiDBLite consensus disorder prediction 174 192 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4996g00052 20 236 Response Regulator Gene Family AT4G16110 31.034 1.92e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4996g00052 Response_reg 3.3e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4996g00052 - - qsa:O6P43_027161 206.068