Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4996g00029 ATGGTGGTTGAAGATAATAATCATGATGATGGTCGTTCAACAGAAGAATGGTTGTTTCAAGCACAAGAGCTTGTCCCTCTTGCTCTCGAGAAGGCCGGGGAGGTGAAGAATTTCCCAGGAAGGTGGAAGATGATCATATCAAAACTTGAACAGATCCCGTGTCGTTTATCAGACTTGTCGAGTCATCCATGCTTCTCCAAGAACGCTCTGTGCAAGGAGCAATTGCAGGCTGTATCATCGATACTCAGAGAAGCCATTCATTTGGCCGAGCTTTGCGTGAAGGAGAAGTACGAAGGCAAGCTCAAGATGCAGAGTGATCTCGATGCCTTGTCAGGGAAACTCGATTTACACTTGAAAGATTGCGGCCTGTTGATCAAAACTGGAGTTCTTGGGGAGGCCACTTTGCCGTTGGCAATATCATCAGAAGCTGATGTTTCGAGCAATATCAGGGAGTTACTGGCTCGCCTGCAGATCGGTCACTTGGAGGCAAAACACAGGGCTATAGAGAAACTACATGATGTAATGAAAGAAGATGAGAAGAGTGTTTTAGCTGTTTTAACACGTAGCAACATTTCTGCTTTGGTTCAATTGCTCACTGCTACTTCTCCCAGGATAAGAGAGAAAACTGTTACCATTATATGCAGTCTTGCGGAATCAGGGAGCTGTGAGAATTGGTTAATTTCTGAAGGAGTTATTCCGCCTCTGATAAGGCTCGTTGAATCAGGAAGTGCCATTGGGAAAGAGAAGGCTACCATAACCTTCCAGAGGCTCTCCATGTCATCAGAAACTGCTCGTGCCATTGTTGGACATGGTGGGGTTCGTCCACTCATTGATCTCTGTCAGACTGGTGATTCTGTGTCACAGGCTGCTTGTGCTTGTACTTTGAAGAACATATCTGCTGTCCCAGAGGTTCGACAAGTTCTAGCCGAGGAAGGGATTGTTAAGGTAATGATCAGTCTCCTAAACTGTGGAATGTTGTTAAACTCCAAAGAGTATGCAGCTGAGTGCCTACAGAATCTCACTTCTAGCAATGAGAATCTAAGAAGGCTTGTCATATCAGAAAATGGAATTAGAAGCCTTTTAGCTTATTTAGACGTTCCTCTTCCCCAAGAATCTTCAATGGGAGCCTTGAGGAACTTAGTAGGATCTGTCTCTGAACAGTCTCTAGTTTCCACGGGCCTACTTCCTCGCTTGGCTCATGTCCTAAAATCCGGGTCTACCGGGGCCCAACAAGCGGCTGCATCTACAATCTGTAAAATTTGCAGCTCAGGAGAGATGAAGAAGATGATTGGTGAGGCTGGGTGTGTCCCTCTGCTTGTGAAAATGCTGGAGGCTAAGTCTAACGGTGCTAGGGAGGTGGCTGCACAAGCGATTTCAAGCTTGATGATGCTGTCTCAGAATCAAAGAGAGGTGAAGAAGAATGACAAGAGCGTGCCCAGTCTTGTTCAGTTGCTTGATCCAAGTGCTCAAAATACTGCAAAGAAATATGCTGTGGCATGCCTTGGATCGCTTTCTTCGAGCCAAAAGTGTAGGAAACTGATGATCTCCTACGGAGCAATCGGGTATCTGAAGAAGCTCACAGAGATGGAGATTCCGGGAGCGAAGAAGTTACTTGAGAGATTGGAAAGAGGGAAATTGAGAAGCCTATTTAGCAGGAAATAG 1662 0.4573 MVVEDNNHDDGRSTEEWLFQAQELVPLALEKAGEVKNFPGRWKMIISKLEQIPCRLSDLSSHPCFSKNALCKEQLQAVSSILREAIHLAELCVKEKYEGKLKMQSDLDALSGKLDLHLKDCGLLIKTGVLGEATLPLAISSEADVSSNIRELLARLQIGHLEAKHRAIEKLHDVMKEDEKSVLAVLTRSNISALVQLLTATSPRIREKTVTIICSLAESGSCENWLISEGVIPPLIRLVESGSAIGKEKATITFQRLSMSSETARAIVGHGGVRPLIDLCQTGDSVSQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGMLLNSKEYAAECLQNLTSSNENLRRLVISENGIRSLLAYLDVPLPQESSMGALRNLVGSVSEQSLVSTGLLPRLAHVLKSGSTGAQQAAASTICKICSSGEMKKMIGEAGCVPLLVKMLEAKSNGAREVAAQAISSLMMLSQNQREVKKNDKSVPSLVQLLDPSAQNTAKKYAVACLGSLSSSQKCRKLMISYGAIGYLKKLTEMEIPGAKKLLERLERGKLRSLFSRK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4996g00029 553 Gene3D - 387 533 IPR011989 -
Pral4996g00029 553 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 551 - -
Pral4996g00029 553 SMART arm_5 260 300 IPR000225 GO:0005515
Pral4996g00029 553 SMART arm_5 423 463 IPR000225 GO:0005515
Pral4996g00029 553 SMART arm_5 383 422 IPR000225 GO:0005515
Pral4996g00029 553 SMART arm_5 464 506 IPR000225 GO:0005515
Pral4996g00029 553 SMART arm_5 301 342 IPR000225 GO:0005515
Pral4996g00029 553 SMART arm_5 343 382 IPR000225 GO:0005515
Pral4996g00029 553 SMART arm_5 178 218 IPR000225 GO:0005515
Pral4996g00029 553 Pfam Armadillo/beta-catenin-like repeat 425 461 IPR000225 GO:0005515
Pral4996g00029 553 Pfam Armadillo/beta-catenin-like repeat 261 300 IPR000225 GO:0005515
Pral4996g00029 553 SUPERFAMILY ARM repeat 146 532 IPR016024 -
Pral4996g00029 553 Gene3D - 121 386 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4996g00029 Pral-Chr4996 103359 106799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4996g00029 303 529 U-box Gene Family AT2G23140 28.879 1.52e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4996g00029 - - gmx:100789140 869.766