Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4992g00001 ATGGGTGATCATGAGGTTCAACAAAAACCAGAAAAAGAACCCTTGCTTTCGTATTCAAAAAATCATACTTCTAATCCCAATAAGAAGATGAATGACTTACAGAGAAGAAGGCGTCCCCCGCACGGGGATGTTTCTTCTGAGAATGGTATCAACAAGGAAGAAGAAAATCTGATTCAACAAACTCTACAATTATCAAATTTAGATTCTGAATTCAAATCCAAGAAACTAGTCTTATTGCTGATCTTAACTGCTTACCTAGGATTAGGAACCCTATCCTTCTTCCTCATAAGGAATCAAATAATGGGCATACAGACCAATGGCTTCCTTGATGCCCTATACTTTTGTGTCGTGACTATGACCACAGTAGGGTATGGAGACCTTGTTCCCAACAGCAAATTGGCCAAACTTCTCGCAAGTGTCTATGTCTTCACAGGCATGGCCCTTGTAGGGATGATCATGAGCAAAGCAGCAGATTACTTTCTTGAGAAGCAAGAAATCCTATTGGTTCGAGCCATCCACATGGGCGAAAAAGTGAGTCCCTCAGAACTTCTTGAAGAGGTTGAGGCACAAAAAGTGAAGTACAAGTTCTTGATAACATTAGCTGTTCTTCTAGTGCTCATGATGGTGGGAACTGTTTTTTTGCATTTGGTTGAGAATCTAGAGCTTTTGGATGCCTTTTATTGTGTTTGTTCTACTGTTACTACATTAGGATATGGTGACAAGAGCTTCTCCACAAGCACTGGACGTGGTTTTGCTGTGTTTTGGATATTGAGTAGCACCATTTGCTTGGCTCAGTTTTTCTACTATCTAGCTGAACTCTACACTGAAGGTAGACAAAAATCACTGGTCAGAACTGTTCTTTCCAGAAAACTCTTACGCTCAGATCTTGAGGCCGCAGATCTTGATCATGACAATGTTGTTAGCGCCGCGGAGTTCATTGTGTACAAGTTGAAGGAAATGGGAAGGATCAGTCAACAAGATATTTCTATTGTGATGGATGCTTTTAGGAAACTTGACTATGATAAATCAGGAACTTTGACTGAAGCTGATCTCGGATATTCTGGGTCATCTTGA 1074 0.406 MGDHEVQQKPEKEPLLSYSKNHTSNPNKKMNDLQRRRRPPHGDVSSENGINKEEENLIQQTLQLSNLDSEFKSKKLVLLLILTAYLGLGTLSFFLIRNQIMGIQTNGFLDALYFCVVTMTTVGYGDLVPNSKLAKLLASVYVFTGMALVGMIMSKAADYFLEKQEILLVRAIHMGEKVSPSELLEEVEAQKVKYKFLITLAVLLVLMMVGTVFLHLVENLELLDAFYCVCSTVTTLGYGDKSFSTSTGRGFAVFWILSSTICLAQFFYYLAELYTEGRQKSLVRTVLSRKLLRSDLEAADLDHDNVVSAAEFIVYKLKEMGRISQQDISIVMDAFRKLDYDKSGTLTEADLGYSGSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4992g00001 357 MobiDBLite consensus disorder prediction 29 50 - -
Pral4992g00001 357 MobiDBLite consensus disorder prediction 1 52 - -
Pral4992g00001 357 Gene3D - 56 177 - -
Pral4992g00001 357 PRINTS Two pore domain K+ channel signature 117 145 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4992g00001 357 PRINTS Two pore domain K+ channel signature 234 243 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4992g00001 357 SUPERFAMILY Voltage-gated potassium channels 74 170 - -
Pral4992g00001 357 Pfam Ion channel 202 274 IPR013099 -
Pral4992g00001 357 Pfam Ion channel 81 160 IPR013099 -
Pral4992g00001 357 ProSitePatterns EF-hand calcium-binding domain. 339 351 IPR018247 -
Pral4992g00001 357 SUPERFAMILY Voltage-gated potassium channels 191 289 - -
Pral4992g00001 357 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 77 329 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4992g00001 357 Gene3D - 200 261 - -
Pral4992g00001 357 Pfam EF hand 333 347 IPR002048 GO:0005509
Pral4992g00001 357 Gene3D - 262 354 - -
Pral4992g00001 357 ProSitePatterns EF-hand calcium-binding domain. 300 312 IPR018247 -
Pral4992g00001 357 Coils Coil 50 70 - -
Pral4992g00001 357 SUPERFAMILY EF-hand 270 351 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4992g00001 Pral-Chr4992 11559 13123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4992g00001 78 351 Ion Channels AT5G55630 60.949 1.01e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4992g00001 K05389 - qsa:O6P43_031367 429.098