Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4991g00006 ATGGGTGATCATGAGGTTCAACAAAAACCAGAAAAAGAACCCTTGCTTTCGTATTCAAAAAATCATACTTCTAATCCCAATAAGAAGATGAATGACTTACAGAGAAGAAGGCGTCCCCCGCACGGGGATGTTTCTTCTGAGAATGGTATCAACAAGGAAGAAGAAAATCTGATTCAACAAACTCTACAATTATCAAATTTAGATTCTGAATTCAAATCCAAGAAACTAGTCTTATTGCTGATCTTAACTGCTTACCTAGGATTAGGAACCCTATCCTTCTTCCTCATAAGGAATCAAATAATGGGCATACAGACCAATGGCTTCCTTGATGCCCTATACTTTTGTGTCGTGACTATGACCACAGTAGGGTATGGAGACCTTGTTCCCAACAGCAAATTGGCCAAACTTCTCGCAAGTGTCTATGTCTTCACAGGCATGGCCCTTGTAGGGATGATCATGAGCAAAGCAGCAGATTACTTTCTTGAGAAGCAAGAAATCCTATTGGTTCGAGCCATCCACATGGGCGAAAAAGTGAGTCCCTCAGAACTTCTTGAAGAGGTTGAGGCACAAAAAGTGAAGTACAAGTTCTTGATAACATTAGCTGTTCTTCTAGTGCTCATGATGGTGGGAACTGTTTTTTTGCATTTGGTTGAGAATCTAGAGCTTTTGGATGCCTTTTATTGTGTTTGTTCTACTGTTACTACATTAGGATATGGTGACAAGAGCTTCTCCACAAGCACTGGACGTGGTTTTGCTGTGTTTTGGATATTGAGTAGCACCATTTGCTTGGCTCAGTTTTTCTACTATCTAGCTGAACTCTACACTGAAGGTAGACAAAAATCACTGGTCAGAACTGTTCTTTCCAGAAAACTCTTACGCTCAGATCTTGAGGCCGCAGATCTTGATCATGACAATGTTGTTAGCGCCGCGGAGTTCATTGTGTACAAGTTGAAGGAAATGGGAAGGATCAGTCAACAAGATATTTCTATTGTGGATGCTTTTAGGAAACTTGACTATGATAAATCAGGAACTTTGACTGAAGCTGATCTCGGATATTCTGGGTCATCTTGA 1071 0.4062 MGDHEVQQKPEKEPLLSYSKNHTSNPNKKMNDLQRRRRPPHGDVSSENGINKEEENLIQQTLQLSNLDSEFKSKKLVLLLILTAYLGLGTLSFFLIRNQIMGIQTNGFLDALYFCVVTMTTVGYGDLVPNSKLAKLLASVYVFTGMALVGMIMSKAADYFLEKQEILLVRAIHMGEKVSPSELLEEVEAQKVKYKFLITLAVLLVLMMVGTVFLHLVENLELLDAFYCVCSTVTTLGYGDKSFSTSTGRGFAVFWILSSTICLAQFFYYLAELYTEGRQKSLVRTVLSRKLLRSDLEAADLDHDNVVSAAEFIVYKLKEMGRISQQDISIVDAFRKLDYDKSGTLTEADLGYSGSS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4991g00006 356 MobiDBLite consensus disorder prediction 29 50 - -
Pral4991g00006 356 Pfam EF hand 330 346 IPR002048 GO:0005509
Pral4991g00006 356 MobiDBLite consensus disorder prediction 1 52 - -
Pral4991g00006 356 Pfam Ion channel 81 160 IPR013099 -
Pral4991g00006 356 Pfam Ion channel 202 274 IPR013099 -
Pral4991g00006 356 SUPERFAMILY Voltage-gated potassium channels 74 170 - -
Pral4991g00006 356 ProSitePatterns EF-hand calcium-binding domain. 338 350 IPR018247 -
Pral4991g00006 356 Gene3D - 179 284 - -
Pral4991g00006 356 Gene3D - 287 352 - -
Pral4991g00006 356 SUPERFAMILY Voltage-gated potassium channels 191 289 - -
Pral4991g00006 356 SUPERFAMILY EF-hand 288 350 IPR011992 -
Pral4991g00006 356 ProSitePatterns EF-hand calcium-binding domain. 300 312 IPR018247 -
Pral4991g00006 356 Gene3D - 56 178 - -
Pral4991g00006 356 Coils Coil 50 70 - -
Pral4991g00006 356 PRINTS Two pore domain K+ channel signature 117 145 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4991g00006 356 PRINTS Two pore domain K+ channel signature 234 243 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4991g00006 356 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 329 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4991g00006 Pral-Chr4991 38372 39919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4991g00006 78 350 Ion Channels AT5G55630 60.949 5.42e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4991g00006 K05389 - qsa:O6P43_031367 422.55