Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4985g00012 ATGGAAGAAAAAGGGTTGGTGGTGTTGATGGTGATGCTAAGTTTGTTTGCTTCGAGTTTTAGCGTTTCTTCTTCACCTCTCAACAATGAAGGTTTGGCTCTGTTAAAGTTGAAGAACAGAGTGGTAAGAGACCCATTTGGAGCTTTGTCCAATTGGAATGGCGAAGGCGTACATACCGATCCCTGTTCATGGTTTGGAGTAGAATGCTCCGTTCACGGCAAAGTTGTTTCCTTGAATTTGAAGGACCTTTGTCTTGAAGGAACACTAGCCCCTGAAATTGGGAAGCTGACTCACATAAAATCTATCATTTTGCGCAACAATTCTCTTTTTGGAGAGATTCCTAAAGAGATATCACAACTGGAGGAGCTGGAAGTCCTTGACTTGGCACATAACAACTTTAAAGGATCGTTTCCATCTGACCCGGGCAGCAATCCATCCCTCACTACCCTGCCCATAGACCACCATGGGGATTTGCATTACAAGAGGAAACTTCTTCATAGATCAAAAGCAAGGAGACTAAGAGATGATAACAAAGAGTCGATTTCACCATCATCCTCACCTTTCCCCTCTTCATTACCACCAGATTATGAGCCTTTCTCGCCATCAGAATCACCCTCAAATCCACCATCTGCATTAACCCCATCACCATATATTCTCCCACCTTTAAGGTCCCCTGAAGTTTCCCCTTCACCTTCTCCGTCCTCTATTTTTCTCACTCCTTCAATTTCACCAATGGTGACACCAACCCCAGGAATATCACTACCAGCAAATCCACCTACTGTTGTATCCTCTCCTTCACAGTCCAATTGGATTTCAGAGCCTTCCCCTGCTTCATTTTGGAACCAAGGGAGCACAAAAAGTTTCAAGCCCCAGAAATCTCTGATCATTTGGTCAACAGCTGGGGGCGTATCCTTGCTGGTTGTCGTGTCAGCGATTGTTTTTACTTGCTTCCGAACTAGCAGGGTCGTAACTGTGAAACCTTGGTCCACAGGGTTAAGTGGGCAGCTGCAGAAGGCTTTCATCACAGGTGTGCCAAATCTCAGACGAGCAGAGGTTCAAGCAGCTTGTGAAGATTTCAGCAACATCATCGGTTCTATTCCAGAGGGCACTGTTTACAAAGGGACTCTTTCCAGTGGTGTTGAGATTGCTGTAGTATCTACTGCAGTGACCTCATCTAAATACTGGCCTAAAACTATGGAAGCTCAATTTAGAAGAAAGATAGAGACCTTATCCCGTGTGAACCACAAGAACTTTGTGAATCTTATCGGGTACTGTGAAGAGAAGAAACCATTCACAAGAATGATGGTCTTTGAGTATGCTCCAAATGGAACTCTCTTTGAACATCTACATATAAGAGAAGCAGAGCAGCTAGACTGGGGAATGAGAATGAGGATTGCTATGGGAATAGCTTATTGCCTAGAACATATGCATCAGCTGGAACCACCCATTTCCCTCAGAAACCTTCAGTCTTCATCTATATATCTCACTGAAGACAATGCTGCTCAAGTATCAGACCTTTGTTTCTGGAATGACATGGCTGCTGCTACAAAGAAAAGTTCTGCAGCCACAGAGCCATCGGAAACACCGTCAACATACCCCAAGGAAAATGTTTATAGCTTTGGCGTTATACTGTTTGAGTTGATCACAGGGCGAACTCCCTATCCTGTGGAGATTGGCTTTCTGTCACAGTACTTAACAATGGGGCAATCCCTGAGAGATTTGGTGGATCCAACTCTGAACTCTGTGCAAGCAGAAGAGGTTGAGAAATGGTGGGAATTGATAAAAGAGTGCTTGCATTCAGAACCAGAGAAAAGGCCTACTATGAGAGAGGTTGCAGCTAAGTTGAAGGAAATAACTGGCATGGGACCTGATGGAGCAACTCCAAAATCTTCCCCTCTTTGGTGGGCAGAACTCGAAATTATGTCCACGGATTCTGCCTGA 1941 0.4456 MEEKGLVVLMVMLSLFASSFSVSSSPLNNEGLALLKLKNRVVRDPFGALSNWNGEGVHTDPCSWFGVECSVHGKVVSLNLKDLCLEGTLAPEIGKLTHIKSIILRNNSLFGEIPKEISQLEELEVLDLAHNNFKGSFPSDPGSNPSLTTLPIDHHGDLHYKRKLLHRSKARRLRDDNKESISPSSSPFPSSLPPDYEPFSPSESPSNPPSALTPSPYILPPLRSPEVSPSPSPSSIFLTPSISPMVTPTPGISLPANPPTVVSSPSQSNWISEPSPASFWNQGSTKSFKPQKSLIIWSTAGGVSLLVVVSAIVFTCFRTSRVVTVKPWSTGLSGQLQKAFITGVPNLRRAEVQAACEDFSNIIGSIPEGTVYKGTLSSGVEIAVVSTAVTSSKYWPKTMEAQFRRKIETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHMHQLEPPISLRNLQSSSIYLTEDNAAQVSDLCFWNDMAAATKKSSAATEPSETPSTYPKENVYSFGVILFELITGRTPYPVEIGFLSQYLTMGQSLRDLVDPTLNSVQAEEVEKWWELIKECLHSEPEKRPTMREVAAKLKEITGMGPDGATPKSSPLWWAELEIMSTDSA 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4985g00012 646 Gene3D Phosphorylase Kinase; domain 1 333 439 - -
Pral4985g00012 646 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Pral4985g00012 646 SUPERFAMILY L domain-like 31 154 - -
Pral4985g00012 646 FunFam Inactive receptor-like serine/threonine-protein kinase 331 439 - -
Pral4985g00012 646 PANTHER PROTEIN MALE DISCOVERER 2 9 643 - -
Pral4985g00012 646 FunFam Leucine-rich repeat receptor-like kinase 31 155 - -
Pral4985g00012 646 MobiDBLite consensus disorder prediction 187 228 - -
Pral4985g00012 646 Pfam Protein tyrosine and serine/threonine kinase 361 615 IPR001245 GO:0004672|GO:0006468
Pral4985g00012 646 Gene3D Transferase(Phosphotransferase) domain 1 441 621 - -
Pral4985g00012 646 SUPERFAMILY Protein kinase-like (PK-like) 343 615 IPR011009 -
Pral4985g00012 646 ProSiteProfiles Protein kinase domain profile. 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4985g00012 646 MobiDBLite consensus disorder prediction 165 234 - -
Pral4985g00012 646 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4985g00012 Pral-Chr4985 77007 81261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4985g00012 10 550 Receptor kinase-like Gene Family AT2G23950 28.597 1.02e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pral4985g00012 PK_Tyr_Ser-Thr 5.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4985g00012 - - gmx:100814122 788.489