Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4984g00003 ATGTCCAAGGTTGTCTGTGTCACCGGAGCCAGCGGCGCCATCGGATCGTGGCTCGTCCGCCTCCTACTCGACCGTGGCTACACCGTCCACGCCACCGTTCAAAATCTCAAGGATGACAATGAGACGAAGCATTTGGAGGCGATGGAAGGAGCGAAGAGTAGGCTGCGTTTGTTCGAGATGGATCTTCTGGACACAGACTCCATCAAAGCCGCCGTGAAGGGCTGCGCCGGCGTCTTCCATCTGGCGTGTCCTAACGTCATCGGTCAGGTTCATGATCCAGAGAAGCAAATAGTGGAGCCGGCGACAAAAGGGACGGTGAGCGTGCTGAAGGCGGCGAGAGAAGCAGGGGTGGAGAGAGTGGTGGCGACGTCGTCGATATCGGCGATTATTCCGAGTCCCGACTGGCCCTCCGACAAGATCAAAAACGAGGACTGTTGGTGTGACCTTGACTACTGCAGAAGCAAGGGGCTATGGTATCCGATAGCGAAAACGCTGGCGGAGAAAGCAGGGTGGGATTTTGCGAGGGAGACAGGGTACGACGTCGTTATGATAAATCCGGGCACCGCCTTAGGCCCTCTCATTCCGCCCAGACTCAATTCAAGCATGGCTGTCCTTCTCGGCGTTCTCGAAGGGGACACTGAGACATACGAGGACTTCTTCATGGGAATGGCGCACTTTAAGGATGTCGCCATGGCTCACATCTTGGCCTTCGAGAATAAAGAGGCTTCTGGAAGGCACTTGTGCGTGGAAGCCATTCGTCACTACGGTGATTTTGTGGAAAAGGTGGCTGAATTGTACCCTGACTATAATGTCGCTAAAGTGCCCAAGGATACTCAGCCTGGTCTTCTCCGAGCCAAGGATGCTTCTAAGAAGTTGATCAATCTGGGGATGCAGTTCACCCCCATTGAGCAAATCATCACTGATGCTGTTGAAAGTTTGAAGAGCAAGGGCTTTCTCTAA 960 0.5385 MSKVVCVTGASGAIGSWLVRLLLDRGYTVHATVQNLKDDNETKHLEAMEGAKSRLRLFEMDLLDTDSIKAAVKGCAGVFHLACPNVIGQVHDPEKQIVEPATKGTVSVLKAAREAGVERVVATSSISAIIPSPDWPSDKIKNEDCWCDLDYCRSKGLWYPIAKTLAEKAGWDFARETGYDVVMINPGTALGPLIPPRLNSSMAVLLGVLEGDTETYEDFFMGMAHFKDVAMAHILAFENKEASGRHLCVEAIRHYGDFVEKVAELYPDYNVAKVPKDTQPGLLRAKDASKKLINLGMQFTPIEQIITDAVESLKSKGFL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4984g00003 319 Pfam NAD dependent epimerase/dehydratase family 5 242 IPR001509 -
Pral4984g00003 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Pral4984g00003 319 Gene3D - 1 319 - -
Pral4984g00003 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
Pral4984g00003 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Pral4984g00003 319 CDD FR_SDR_e 5 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4984g00003 Pral-Chr4984 1799 4261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4984g00003 3 319 Monolignol Biosynthesis Gene Families AT5G58490 67.823 1.44e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4984g00003 - - gmx:100806281 527.709