Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4983g00008 ATGGGAAGGAGGAATTTCTATGGACCAGCAGCTCCAGGGACAACCTTAAACACGGTCACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTACTTTTCACCCCATGAGCCTCAGAAGTTCGCTGCTGTTCATAAAGTGTTCGGTGCAAGCAATGTCTCCAAGATGTTAATGGAGGTGCCTGACAGCCAAAGGGCAGATGCTGCAAACAGTCTGGTTTATGAAGCTAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCGATATCAGCTTTGCAGCAACAAGTTCAGTCATTACAGGCGGAGCTAAATGCTCTAAGAACTGAGATTATGAAGTACAAGTACAGAGAAGCGGCTAGTCAGATCATTTCTTCTCATGGGGCTTTGGTTTCTTCCGTGGAGGACCCCATTTCTGCAGAATCACAACAAGGTCTTTCTCAACCTCAGCCTCAACCTCATCATCCAAAACCATCATTACCTTCTTCTGCTTCTGTTGTTCTCTCATCTTTGTCTTCATCTTCCAGTTCTTCTGTATACACACCCCCTAAAAGCTCAATCAGCCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTAA 636 0.4591 MGRRNFYGPAAPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPDSQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNALRTEIMKYKYREAASQIISSHGALVSSVEDPISAESQQGLSQPQPQPHHPKPSLPSSASVVLSSLSSSSSSSVYTPPKSSISHGSISSENVPYFV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4983g00008 211 ProSiteProfiles LOB domain profile. 20 121 IPR004883 -
Pral4983g00008 211 MobiDBLite consensus disorder prediction 172 205 - -
Pral4983g00008 211 Pfam Lateral organ boundaries (LOB) domain 21 117 IPR004883 -
Pral4983g00008 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 165 - -
Pral4983g00008 211 Coils Coil 100 127 - -
Pral4983g00008 211 MobiDBLite consensus disorder prediction 147 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4983g00008 Pral-Chr4983 23612 24822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4983g00008 1 131 AS2 family AT2G30340 80.303 3.93e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4983g00008 LOB 5.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4983g00008 - - gmx:100813489 270.396