Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4983g00007 ATGCTTGGATGTCCAGAAACAGAAAGAGCAGAAGAGATAGCGAAGAGCACAGCAGAGGCGGCTGAAGCGTCTTGTCAAATGGGAAGGAGGAATTTCTATGGACCAGCAGCTCCAGGGACAACCTTAAACACGGTCACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTACTTTTCACCCCATGAGCCTCAGAAGTTCGCTGCTGTTCATAAAGTGTTCGGTGCAAGCAATGTCTCCAAGATGTTAATGGAGGTGCCTGACAGCCAAAGGGCAGATGCTGCAAACAGTCTGGTTTATGAAGCTAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCGATATCAGCTTTGCAGCAACAAGTTCAGTCATTACAGGCGGAGCTAAATGCTCTAAGAACTGAGATTATGAAGTACAAGTACAGAGAAGCGGCTAGTCAGATCATTTCTTCTCATGGGGCTTTGGTTTCTTCCGTGGAGGACCCCATTTCTGCAGAATCACAACAAGGTCTTTCTCAACCTCAGCCTCAACCTCATCATCCAAAACCATCATTACCTTCTTCTGCTTCTGTTGTTCTCTCATCTTTGTCTTCATCTTCCAGTTCTTCTGTATACACACCCCCTAAAAGCTCAATCAGCCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTAA 714 0.4636 MLGCPETERAEEIAKSTAEAAEASCQMGRRNFYGPAAPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPDSQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNALRTEIMKYKYREAASQIISSHGALVSSVEDPISAESQQGLSQPQPQPHHPKPSLPSSASVVLSSLSSSSSSSVYTPPKSSISHGSISSENVPYFV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4983g00007 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 43 191 - -
Pral4983g00007 237 MobiDBLite consensus disorder prediction 198 231 - -
Pral4983g00007 237 Pfam Lateral organ boundaries (LOB) domain 47 143 IPR004883 -
Pral4983g00007 237 MobiDBLite consensus disorder prediction 173 237 - -
Pral4983g00007 237 ProSiteProfiles LOB domain profile. 46 147 IPR004883 -
Pral4983g00007 237 Coils Coil 126 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4983g00007 Pral-Chr4983 23465 24822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4983g00007 8 157 AS2 family AT2G30340 73.026 6.20e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4983g00007 LOB 6.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4983g00007 - - gmx:100813489 291.197