Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4983g00006 ATGTCCAGAAACAGATACCAATTGGACATGGTAAATGAAAGAGCAGAAGAGATAGCGAAGAGCACAGCAGAGGCGGCTGAAGCGTCTTGTCAAATGGGAAGGAGGAATTTCTATGGACCAGCAGCTCCAGGGACAACCTTAAACACGGTCACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTACTTTTCACCCCATGAGCCTCAGAAGTTCGCTGCTGTTCATAAAGTGTTCGGTGCAAGCAATGTCTCCAAGATGTTAATGGAGGTGCCTGACAGCCAAAGGGCAGATGCTGCAAACAGTCTGGTTTATGAAGCTAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCGATATCAGCTTTGCAGCAACAAGTTCAGTCATTACAGGCGGAGCTAAATGCTCTAAGAACTGAGATTATGAAGTACAAGTACAGAGAAGCGGCTAGTCAGATCATTTCTTCTCATGGGGCTTTGGTTTCTTCCGTGGAGGACCCCATTTCTGCAGAATCACAACAAGGTCTTTCTCAACCTCAGCCTCAACCTCATCATCCAAAACCATCATTACCTTCTTCTGCTTCTGTTGTTCTCTCATCTTTGTCTTCATCTTCCAGTTCTTCTGTATACACACCCCCTAAAAGCTCAATCAGCCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTAA 729 0.4595 MSRNRYQLDMVNERAEEIAKSTAEAAEASCQMGRRNFYGPAAPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPDSQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNALRTEIMKYKYREAASQIISSHGALVSSVEDPISAESQQGLSQPQPQPHHPKPSLPSSASVVLSSLSSSSSSSVYTPPKSSISHGSISSENVPYFV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4983g00006 242 ProSiteProfiles LOB domain profile. 51 152 IPR004883 -
Pral4983g00006 242 MobiDBLite consensus disorder prediction 203 236 - -
Pral4983g00006 242 Pfam Lateral organ boundaries (LOB) domain 52 148 IPR004883 -
Pral4983g00006 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 48 196 - -
Pral4983g00006 242 MobiDBLite consensus disorder prediction 178 242 - -
Pral4983g00006 242 Coils Coil 131 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4983g00006 Pral-Chr4983 23465 24822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4983g00006 1 162 AS2 family AT2G30340 68.902 1.03e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4983g00006 LOB 7.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4983g00006 - - gmx:100813489 281.567