LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4982g00009	ATGGAGAACAGATCAAGTGTTTTAATGGGAAGGTATGAATTAGGAAGATTGCTAGGGCAAGGTACTTTTGCAAAAGTGTACTATGCGCGAAGCACATCAACTAATCAGAGTGTGGCTATTAAGGTAATTGACAAAGATAAGGTTATGAAATCTGGGGAAGCCGAACGCATCAAGCGTGAAATATCTATCATGAGGAAGGTTAAACATCCCTATATTATACAGCTTCTTGAGGTTATGGCCACCAAGAGCAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGTGAACTCTTCACAAAGTTAGCTAAAAAAGGAAAGCTCAAAGAGGATGTTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGATTTTTGCCACAGCAGAGGCGTGTACCACCGAGATATTAAACCAGAGAACCTTTTGTTGGATGAAAATGGGGATCTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTGGCGGAATCCAAGCGGGAAGATGGCCTGCTGCATACAACTTGTGGCACACCTGCATATGTTGCTCCTGAAGTCATTAAAAGGAAAGGGTATGATGGTGCCAAAGCTGATGTTTGGTCTTGTGGGGTAGTATTGTTCGTATTATTGGCAGGTTATCTCCCATTTCATGATCCAAATTTGGTAGAGATGTATAGGAAAATTGACAAGGCAGAATTTGAATGTCCTAATGGGTTCTCACCAGAAGTTCGCACACTTCTATGCAAGATGTTAAATCCAGATCCTGATGCTAGGATTTCCATGGAAAAGATTAGGGAGTGTGCTTGGTTTAAGAAAGGACCAAATTCTAAACATAAAAAACCTGTAGTGGGAAAGAAGGCTGTCTCTTCATCAGGTAAAAATCCTTCCACTCGAAGCGACGAAGCAGAAGCAAAGCAGGAGTCAGTCGTACCATCCAGTATAAATGCATTTGATATCATATCTCTTTCTGCTGGTTTTGATCTTTCTGTATTCTTTGAAGACGATTTTAAGAAGAGAGAAGCTAGATTTACCTCAAGACAACCTGCACCAGCTATCATCTCGAAGCTGGAAGAGGCTGCTAAGCTTCTGAAGATGAAAATAAAGAAGAAAGCCGCAGGATTGTTAAAGCTAGAGGGCCTCAAGGAAGGCAGAAAGGGTATTTTGTCCATTGATGCAGAGATCTTTGAGGTCACTCCGTATTTCCATCTGGTGGAGGTGAAAAAATCAGATGGAGATACATTGGAATTTCAGAAAATACTGAAAGAAGGTATAAGGCCTGCTCTTCAGGATATTGTCTGGATTTGGCAAGGAGATGACCAATCGCAGCAATCACAGCAATCAGAGCAACAACTGCAGACGCATGAGCCGCAGCCACAGCAATAA	1374	0.4148	MENRSSVLMGRYELGRLLGQGTFAKVYYARSTSTNQSVAIKVIDKDKVMKSGEAERIKREISIMRKVKHPYIIQLLEVMATKSKIYFVMEYAKGGELFTKLAKKGKLKEDVAHKYFWQLINAVDFCHSRGVYHRDIKPENLLLDENGDLKVSDFGLSALAESKREDGLLHTTCGTPAYVAPEVIKRKGYDGAKADVWSCGVVLFVLLAGYLPFHDPNLVEMYRKIDKAEFECPNGFSPEVRTLLCKMLNPDPDARISMEKIRECAWFKKGPNSKHKKPVVGKKAVSSSGKNPSTRSDEAEAKQESVVPSSINAFDIISLSAGFDLSVFFEDDFKKREARFTSRQPAPAIISKLEEAAKLLKMKIKKKAAGLLKLEGLKEGRKGILSIDAEIFEVTPYFHLVEVKKSDGDTLEFQKILKEGIRPALQDIVWIWQGDDQSQQSQQSEQQLQTHEPQPQQ	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4982g00009	457	FunFam	Non-specific serine/threonine protein kinase	3	91	-	-
	Pral4982g00009	457	ProSiteProfiles	Protein kinase domain profile.	12	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4982g00009	457	Gene3D	Phosphorylase Kinase; domain 1	2	91	-	-
	Pral4982g00009	457	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	5	423	-	-
	Pral4982g00009	457	CDD	CIPK_C	312	426	-	-
	Pral4982g00009	457	FunFam	Non-specific serine/threonine protein kinase	5	306	-	-
	Pral4982g00009	457	SUPERFAMILY	Protein kinase-like (PK-like)	8	301	IPR011009	-
	Pral4982g00009	457	MobiDBLite	consensus disorder prediction	272	303	-	-
	Pral4982g00009	457	FunFam	Non-specific serine/threonine protein kinase	306	430	-	-
	Pral4982g00009	457	MobiDBLite	consensus disorder prediction	436	457	-	-
	Pral4982g00009	457	ProSitePatterns	Protein kinases ATP-binding region signature.	18	41	IPR017441	GO:0005524
	Pral4982g00009	457	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	131	143	IPR008271	GO:0004672\|GO:0006468
	Pral4982g00009	457	SMART	serkin_6	12	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4982g00009	457	Gene3D	Kinase associated domain 1, KA1	306	431	-	-
	Pral4982g00009	457	Gene3D	Transferase(Phosphotransferase) domain 1	92	291	-	-
	Pral4982g00009	457	ProSiteProfiles	NAF domain profile.	306	330	IPR018451	GO:0007165
	Pral4982g00009	457	Pfam	NAF domain	308	366	IPR004041	GO:0007165
	Pral4982g00009	457	Pfam	Protein kinase domain	12	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4982g00009	Pral-Chr4982	40866	43513	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4982g00009	1	435	CBL-interacting serine-threonine protein kinases	AT5G58380	66.814	0.0	623

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Pral4982g00009		Pkinase	1e-77	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4982g00009	-		-	qsa:O6P43_020433	623.624