Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4981g00075 ATGGGTATTCACAGGTTCAAATTGTCAGATATGATCCCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAGAAAGCAGAAAGGTTCTCATGCTGTGAAGAACAAAGCAAGCTCACCTGTAATGCCCCAGAGGTCGCCCCCAAGTTGTTCGCACCATTTCCCCACAGAACCTTACAGAGCTGGTATGCTTTTCAACTCGCCAATTCATAACAAAGTCAGAGACTTTTCATTCACTGATTCACCAAGAAGGTCATCCAAGAGAAGAGTTCAGAGGAAAACAATTTACAACCCTTCTCCCTCGGCTTTGTCCTCTTTCTCAACTGCTTGCAGCTGCCATTGGACTCAGCCAAATCAAGCCGAGTCTCCGGATTTCTATGCCTCTTCCATTGAGAGTTCTTCCACTGAATTAGATCCCTATGAATGTATCACATCTGAATCTGATGAGTGCGATAGCTTAGCAGCTCCTCACATGTTGAATGGCCTTTCCCCTGACTGCAGTTGCAGGGTTAGTTCTTCCACTAATGATATCATCATAGACATGAACAACGAATCGTTTGCTGTGAATCCTGAAAAGCTAGATGGGTTTGATCCAATTTCGAAACTAGGCCTTCCTCCTATATTAACGAAACCAGCGAGGTTTGATGATCAGGTCATTGAAGCATCTTACTTGAAATGTTCATCTAAGGTGAAGGAAAGCAGCAGAACTACAACTCCAAAGTCCTCGGCTAATTCAAGAGGAATAAGACTTAGAGTCAATTCTGCAAAACTTGCAAGTAGGAAAGTTCAAGCCTGTGCAAGAAGGAGTATATCATCATCCAGTGCGTGCAAGGTTTCAAGCAACACAGGTTTTCCTGAAGGTTTTGCAGTTGTCAAGTCCTCAATTGATCCGCAAAGAGATTTCAAGGATTCAATGGTGGAGATGATCAGGGAGAACAATATATGGTCATCAGAGGATTTGGAGGATCTTCTAGCTTGCTATCTCTCACTTAACGCAAGAGAATACCATGAACTCATAATCAAAGCATTTGAGCAAACTTGGTTTGATTTGGCTCAACTCAGAATGTAA 1074 0.4255 MGIHRFKLSDMIPNAWFYKLKDMSRSRKQKGSHAVKNKASSPVMPQRSPPSCSHHFPTEPYRAGMLFNSPIHNKVRDFSFTDSPRRSSKRRVQRKTIYNPSPSALSSFSTACSCHWTQPNQAESPDFYASSIESSSTELDPYECITSESDECDSLAAPHMLNGLSPDCSCRVSSSTNDIIIDMNNESFAVNPEKLDGFDPISKLGLPPILTKPARFDDQVIEASYLKCSSKVKESSRTTTPKSSANSRGIRLRVNSAKLASRKVQACARRSISSSSACKVSSNTGFPEGFAVVKSSIDPQRDFKDSMVEMIRENNIWSSEDLEDLLACYLSLNAREYHELIIKAFEQTWFDLAQLRM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4981g00075 357 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Pral4981g00075 357 ProSiteProfiles OVATE domain profile. 292 351 IPR006458 -
Pral4981g00075 357 NCBIfam uncharacterized plant-specific domain TIGR01568 290 353 IPR006458 -
Pral4981g00075 357 Pfam Transcriptional repressor, ovate 296 352 IPR006458 -
Pral4981g00075 357 MobiDBLite consensus disorder prediction 35 53 - -
Pral4981g00075 357 MobiDBLite consensus disorder prediction 77 100 - -
Pral4981g00075 357 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 108 353 IPR038933 GO:0045892
Pral4981g00075 357 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4981g00075 Pral-Chr4981 424485 425769 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral4981g00075 Ovate 5.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4981g00075 - - gmx:100780926 430.254