Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4981g00053 ATGGCTCATCATCAAGAGCAGGACAATGAAGTTTTGTTGGATTTCTGGCCAAGCTCTTATGCAATGAGGGTGAAGATTGCTTTGGCCGAGAAGGGCATTGCATACGAATGCAAGCAGGAAGACCTGCAGGCCAAAAGCCCTCTGCTTCTGGAGAAGAATCCAGTTCACAAAATGATCCCAGTTTTGATTCACAATGGAAATTCCATCTGTGAGTCCTTGAATATTGTTCAGTACATTGATGAGACCTGGAACCATGAGCCGCTCCTTCTTTCCTCTGATCCTTATCAGAGATCCCAAGTCAGGTTTTGGGGTGATTACATAGACAATAATGTATACAGAATAGGAAAGAAAGTATGGACAATGAAAGGGAAAGAACAAGAAGAAGGGAAAAAAGAGTTCATAGAATGCCTCAAGAGGCTTGAAGGAGAGCTTGGGGAGAAGGCTTATTTTGGAGGGGAGAAGCTAGGGTATGTGGATGTCGCTCTAGTTCCATTCACCAGCTGGTTCTATACCTACGAGACATTTGGGAATTTTAGCATAGAAGGAGAGTGTCCAAAGCTCGTGGCTTGGGGCAAGAGGTGCATGGAAAGCCAGAGTGTGGCTAAATCCCTGCCTCACCCTCACAAAGTCCATGAATTTGCCATTCAATTTAAGAAGAGAAATGCGTTGGAATAA 675 0.443 MAHHQEQDNEVLLDFWPSSYAMRVKIALAEKGIAYECKQEDLQAKSPLLLEKNPVHKMIPVLIHNGNSICESLNIVQYIDETWNHEPLLLSSDPYQRSQVRFWGDYIDNNVYRIGKKVWTMKGKEQEEGKKEFIECLKRLEGELGEKAYFGGEKLGYVDVALVPFTSWFYTYETFGNFSIEGECPKLVAWGKRCMESQSVAKSLPHPHKVHEFAIQFKKRNALE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4981g00053 224 CDD GST_N_Tau 11 83 - -
Pral4981g00053 224 Pfam Glutathione S-transferase, N-terminal domain 12 81 IPR004045 -
Pral4981g00053 224 FunFam Tau class glutathione S-transferase 3 91 - -
Pral4981g00053 224 Pfam Glutathione S-transferase, C-terminal domain 124 197 IPR004046 -
Pral4981g00053 224 SFLD Glutathione Transferase (cytosolic) 9 221 IPR040079 -
Pral4981g00053 224 SFLD Main.3: Omega- and Tau-like 9 221 IPR045073 -
Pral4981g00053 224 Gene3D Glutaredoxin 3 91 - -
Pral4981g00053 224 CDD GST_C_Tau 94 214 IPR045074 GO:0004364|GO:0006749
Pral4981g00053 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 212 IPR045073 -
Pral4981g00053 224 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
Pral4981g00053 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 217 IPR010987 -
Pral4981g00053 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Pral4981g00053 224 Gene3D - 93 224 - -
Pral4981g00053 224 SUPERFAMILY GST C-terminal domain-like 81 219 IPR036282 -
Pral4981g00053 224 FunFam Glutathione S-transferase U20 93 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4981g00053 Pral-Chr4981 259164 260433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4981g00053 8 224 Glutathione S-transferase Gene Family AT1G17180 59.447 1.10e-97 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4981g00053 K00799 - qsa:O6P43_014161 350.132