Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4981g00027 ATGCATCTTTCGAAAGTCTGGAGGTGCGAAGCTGTATTCAGCTTATGGTTCTGCTGCTGGTTGCTTCTGGCCACAGGGCAGAACTCTGTCACTGACCCCGCTGAAGTTGCCGCATTGAAAACCATCAAAGAGAGTCTTATTGATCCTAATGGAAATCTGAACAGCTGGAATAGTGGAGATCCATGTACATCTCAATGGAGAGGGGTTCATTGTTTCAATAGTACAGTGGCTGATAATCATTTACATGTTAAAGAATTGCGACTACTGAATTTGAACTTGTTTGGAACTTTGGCACCAGAGACTGGAAACCTATCTTATCTGCAAATATTGGACTTTATGTGGAACAATATAAGTGGGAGCATACCAAAGGAAATTGGCAACATCAAAAGTTTGCAACTCTTGCTTCTGAATGGAAACAACTTAACAGGTCGGCTGCCCGAAGAGCTTGGTTATCTTCCAAATCTGAATAGAATGCAAATTGATCAGAACTATATAACAGGACCTATTCCTGCATCGTTTGCAAACCTAAACAAGACACAGCACTTTCACATGAACAATAACTCACTTACTGGACAAATCCCTCGAGAGCTTTCCCGTTTGTCAAGCCTTATTCACCTCCTTCTTGACCATAACAAGTTATCAGGAGATCTTCCGCACGAGCTCTCCCAGATTCCAAAGATACGCATAATCCAGCTTGATAATAATGATTTTGGCGGGAGTACCATTCCAGATTCATACGGTAACATTTCAACGTTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATCCCTGATTTCAGCAGGATACCAGACCTTCTTTATCTTGACCTCAGTTCCAATCAACTAAATGAATCGATTCCTTCTAATAAGCTTTCTGATAAAGTCACCACCATTGATTTGTCAAACAACAAGCTAACTGGAACTATTCCATCCTACTTTTCTGGTCTCCCTAGGCTTCAACTATTGTCACTTTCAAACAATTCACTGAATGGCAGTGTTCCTTCCGCCATTTGGCAGAACCGGACTTCAAATGGAATGCATGAATTGCGTTTGGATTTTCAAAATAATAATCTTTCAAGCATATCAGGCGCTATTGATCTTCCTGCTAACGTCACACTCAGGCTTGATGGAAATCCTCTTTGTTCCAATAACACTCTAGCTCAGCTCTGTGCAAGTGCTAATGACACAAACAGCTTGAGTCTAACAGACTCCAGTGTTGACTGTCCCCCTCAAGCATGCCCTCCTCCTTTTGAATATTCCAAGACATCTTCCGTAAAGTGTTTTTGTGCAGCGCCATTGCTCATCGGCTATCGATTGAAAAGTCCTGGATTTTCCGATTTTAATCCATACCAGACAGATTTTGAGAACTTCCTGGCATCCAATTATAGTTTAATGAATAACCAGGTTGATATTGGCACCCCAGAATGGAAAGCAATTCGACTGCAAATGTACTTGAAGCTTTTTCCGGAATCCACTGATAGCAAAAGCTCCCAGACTTTCAATGAAAGCGAGGTTCTTCGTCTCTATAGCATGTTCGCAGGATGGGTTATTTCAGACAACGAATTATTCGGACCTTATGAACTGCTCAACTTCACTCTTCTGGATCCTTACAAGGATATGTTGTTTGGCCCCGCTACAAGTTCAGGGATAAGCAAGGGTGCACTGGCTGGCATTATCTTAGGAACAATTGCCGGTGCAGTTACGTTATCTACAATTGTGACTCTTCTTATCATGAGGGCGCGGATCAGAGACTACCGAACTCTTTCATCAAAGCGACAATTTTCTAGAATATCAATAAAAATTGAGGGCGTGCGGAGCTTCACTTTTGAAGAAATGGCTTTGGCTACTAACAACTTTAGTGACTCCAGTCAAGCTGGCCAAGGGGGCTATGGGAAAGTTTATAGAGGTATTCTCACCGATGGCACTGTGGTAGCAATAAAACGTGCACAGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTAACAGAAATAGAATTACTATCAAGGTTACATCATCGCAACCTTGTGACTTTGGTCGGATACTGTGATGAAAGAGGTGAACAGATGCTGGTTTATGAATTCATGCCAAATGGCACGCTAAGGGATCATCTTTCTGCTTATTCGAAAGAACCTCTGAGTTTTGGTATGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATTCTGTATCTACATACGGAAGCTGATCCTCCAGTATTCCACCGAGACGTCAAGGCCAGCAACATATTATTGGACTCCAGGCTCAATGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATACTGAAGGAATAGTGCCTGGCCATGTATCTACAGTGGTAAAGGGAACCCCGGGATACCTTGATCCAGAGTACTTTTTAACTCATAAGTTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTCCTTCTGGAAATTTTGACGGGGAAACCACCAATCTCACATGGCAAAAATCTTGTTAGAGAGATTACTGTTGCATACCAATCTGGTGAAGTATTCTCGGTGATGGATAGACGGATGGGGCCCTATCCTTCAGAGCACCTGGAGAAGTTCCTGAACCTGGCTCTCAAGTGTAGCCAAGACGAGCCAGATGCACGACCTAAAATGGCAGAAGTGGTTCGAGAGCTCGAAAACCTGTGGTCCATGATGCCCGAGTTCAATGCCAAGATACCTGAATATATATCCAGTGATTCTGGGAAATTATTCAGTTCACCATCTTCATCCTCTGTTAGCAAAACTCCTTTTATATCGGGAGATATGTCTGGTACTGGTAGCGAGCTAGTTAGTGGAGTAGAGCCAACCATCAGGCCAAGGTAG 2862 0.4312 MHLSKVWRCEAVFSLWFCCWLLLATGQNSVTDPAEVAALKTIKESLIDPNGNLNSWNSGDPCTSQWRGVHCFNSTVADNHLHVKELRLLNLNLFGTLAPETGNLSYLQILDFMWNNISGSIPKEIGNIKSLQLLLLNGNNLTGRLPEELGYLPNLNRMQIDQNYITGPIPASFANLNKTQHFHMNNNSLTGQIPRELSRLSSLIHLLLDHNKLSGDLPHELSQIPKIRIIQLDNNDFGGSTIPDSYGNISTLLKLSLRNCNLQGPIPDFSRIPDLLYLDLSSNQLNESIPSNKLSDKVTTIDLSNNKLTGTIPSYFSGLPRLQLLSLSNNSLNGSVPSAIWQNRTSNGMHELRLDFQNNNLSSISGAIDLPANVTLRLDGNPLCSNNTLAQLCASANDTNSLSLTDSSVDCPPQACPPPFEYSKTSSVKCFCAAPLLIGYRLKSPGFSDFNPYQTDFENFLASNYSLMNNQVDIGTPEWKAIRLQMYLKLFPESTDSKSSQTFNESEVLRLYSMFAGWVISDNELFGPYELLNFTLLDPYKDMLFGPATSSGISKGALAGIILGTIAGAVTLSTIVTLLIMRARIRDYRTLSSKRQFSRISIKIEGVRSFTFEEMALATNNFSDSSQAGQGGYGKVYRGILTDGTVVAIKRAQVGSLQGEREFLTEIELLSRLHHRNLVTLVGYCDERGEQMLVYEFMPNGTLRDHLSAYSKEPLSFGMRLRIALGSAKGILYLHTEADPPVFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLEILTGKPPISHGKNLVREITVAYQSGEVFSVMDRRMGPYPSEHLEKFLNLALKCSQDEPDARPKMAEVVRELENLWSMMPEFNAKIPEYISSDSGKLFSSPSSSSVSKTPFISGDMSGTGSELVSGVEPTIRPR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4981g00027 953 Gene3D Ribonuclease Inhibitor 297 430 IPR032675 -
Pral4981g00027 953 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Pral4981g00027 953 Pfam Leucine rich repeat 297 342 IPR001611 GO:0005515
Pral4981g00027 953 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 907 - -
Pral4981g00027 953 Gene3D Phosphorylase Kinase; domain 1 585 697 - -
Pral4981g00027 953 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Pral4981g00027 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Pral4981g00027 953 PANTHER RECEPTOR-LIKE PROTEIN 55 42 897 - -
Pral4981g00027 953 MobiDBLite consensus disorder prediction 916 953 - -
Pral4981g00027 953 FunFam Leucine-rich repeat protein kinase family protein 586 697 - -
Pral4981g00027 953 SMART serkin_6 622 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4981g00027 953 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Pral4981g00027 953 SUPERFAMILY L domain-like 44 410 - -
Pral4981g00027 953 MobiDBLite consensus disorder prediction 916 943 - -
Pral4981g00027 953 Pfam Protein tyrosine and serine/threonine kinase 627 891 IPR001245 GO:0004672|GO:0006468
Pral4981g00027 953 PRINTS Leucine-rich repeat signature 298 311 - -
Pral4981g00027 953 PRINTS Leucine-rich repeat signature 319 332 - -
Pral4981g00027 953 CDD STKc_IRAK 629 894 - -
Pral4981g00027 953 Gene3D Transferase(Phosphotransferase) domain 1 698 905 - -
Pral4981g00027 953 Gene3D Ribonuclease Inhibitor 32 296 IPR032675 -
Pral4981g00027 953 SMART LRR_typ_2 272 296 IPR003591 -
Pral4981g00027 953 SMART LRR_typ_2 128 152 IPR003591 -
Pral4981g00027 953 SMART LRR_typ_2 319 343 IPR003591 -
Pral4981g00027 953 SMART LRR_typ_2 200 224 IPR003591 -
Pral4981g00027 953 SUPERFAMILY Protein kinase-like (PK-like) 607 917 IPR011009 -
Pral4981g00027 953 ProSiteProfiles Protein kinase domain profile. 622 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4981g00027 Pral-Chr4981 135038 143999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4981g00027 18 905 Receptor kinase-like Gene Family AT5G01950 59.309 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral4981g00027 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4981g00027 - - pcin:129318464 1535.39