Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4981g00026 ATGCATCTTTCGAAAGTCTGGAAGCACGAAGCTGTATTCAGCTTATGGTTCTGTTGCTGGTTGCTTCTGGCTACAGCGCAGAATTCTGTCACTGACCCCGCTGAAGTTGACGCGTTGAAAACCATCAAAGGGCGTCTTATTGATCCTAATGGAAATCTGAACAGCTGGAATAGTGGAGACCCATGTAGATCTCGATGGAGAGGGGTTCATTGCAATAGTACAGTGGCTGATAATCATTTACATGTTAAAGAATTGCGACTACTGAATTTGAACTTGTTTGGAAATTTGGCACCAGAGATTGGAAACCTATCTTATCTGGAAATATTGGACTTTATGTGGAACCATATAAGTGGGAGTATACCAAAGGAAATTGGCAACATCAAAAGTTTGCAACTCTTGCTTCTGAATGGAAACAGCTTAATAGGTCGGCTGCCCGAAGAGCTTGGTTATCTTCCAAATCTGAACAGAATGCAAATTGATCAGAACTATATAACAGGACCAATTCCTACATCGTTTGCAAACCTAAACAAGATACAGCACTTTCACATGAGCAATAACTTATTTACTGGACAAATCCCTCGAGAGTTTTCCCGCTTGTCAAGCCTTATTCACCTCCTTCTTGACCATAACAAGTTATCAGGAGATCTTCCGCACGAGCTGTCCCGGATTCCAAATATACGCATAATCCAGCTTGATAACAATGATTTTGGCGGGAGTGCCATTCCAGATTCTTATGGCAACATTGATAAGTTGTTGAAGTTGACCCTTGGGAACTGCAACTTGCAAGGACCAATCCCTGATTTCAGCGGGATACGAGGCCTTCTTTATCTAAACCTCAGTTCCAATCAATTGAATGAATCCATTCCTTCTAGTAAGCTTTCTGATAAAGTCACCACCATTGATTTGTCAAACAACAAGCTAACTGGAACTATTCCATCCTACTTTTCTGGTCTCCCTAGGCTTCAACTATTGTCACTTTCAAACAATTCACTGAATGGCAGTGTTCCTTCCGCCATTTGGCAGAACCGGACTTCAAATGGAATGCATGAATTGCGTTTGGATTTTCAAAATAATAATCTTTCAAGCATATCAGGCGCTATTGATCTTCCTGCTAACGTCACACTCAGGCTTGATGGAAATCCTCTTTGTTCCAATAACACTCTAGCTCAGCTCTGTGCAAGTGCTAATGACACAAACAGCTTGAGTCTAACAGACTCCAGTGTTGACTGTCCCCCTCAAGCATGCCCTCCTCCTTTTGAATATTCCAAAAAGTGTTTTTGTGCAGCGCCATTGCTCATTGGCTATCGCTTGCGAAGTCCCGGATTTTGCGATTTTAATCCGTATCAGACAGAGTTTGAGAACTTCCTGGCATCCAATTATAGTTTAATGAATCACCAGGTTGATATTGGCACCCCAGAATGGCAAGCACTTCGACTGCAAATGTACTTGAAGCTTTTTCCGGACTCCACTGATGGCAAAAGCTCCCAGACTTTCAATGAAAGCGAGGTTTTTCGTCTTTATAGCATGTTCGCAGGATGGGTTATTCCAGACCACGATTTTTTCGGACCTTATGAATTGCTCAACTTCACTCTTCTGGGTCCGTACAAGGATATGACGTTTGGCCCCGCTACAAGTGCGGGGATAAGCAAGGGTGCACTGGCTGGCATTATCTTAGGAACAATTGCCGGTGCAGTTACGTTATCTACAATTGTGACTCTTCTTATCATGAGGGCGCGGATCAGAGACTACCGGGGGGCACTTTCATCAAAGCGACAACTTTCTAGAACATCAATAAAAATTGAGGGTGTGCGGAGCTTCACTTTTGAAGAAATGGCTTCGGCTACTAACAATTTTAGTGACTCCAGTCAAGCTGGCCAAGGGGGCTATGGGAAAGTATATAGAGGTATTCTCACCGATGGCACTGCGGTAGCAATAAAACGCGCACGGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTAACAGAAATACAATTACTATCAAGGTTACATCATCGCAACCTTGTGACTTTGGTCGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTCATGCCAAATGGCACGCTAAGGGATCATCTTTCTGCTTACTCGAAAGAACCTCTGAGTTTTGGCATGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATCCTGTATCTACATACGGAAGCTGATCCTCCAGTATTCCACCGAGACGTCAAGGCCAGCAACATATTATTGGACTCCAGGCTCAATGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATACTGAAGGAATTGTCCCTGGCCATGTATCTACAGTGGTAAAGGGAACCCCGGGGTACCTTGATCCAGAGTACTTTTTAACTCATAAGTTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTACTTCTGGAACTTTTGACAGGGAAACCGCCAATCTCACATGGCAAAAACCTTGTTAGAGAGATTACTGTTGCATACCAATCTGGTGAAGTATTCTCGGTGATGGATAGACGGATGGGGCCCTATCCTTCAGAGCACCTGGAGAAGTTCCTGACCCTGGCTCTCAAGTGTAGCCAAGATGAGCCAGATGCACGACCTAAAATGGCAGAAGTTGTTCGAGAGCTCGAAAACTTGTGGTCCATGATGCCCGAGTCCAATGCCAAGATACCTGAATATATATCCAGTGATTCTGGGAAATTATTCAGTTCACGGTCTTCATCCTGTGTTAGCAAAACTCCTTTTATATCGGGAGATACGTCTGGTACTGGTAGCGAACTTGTTAGTGGAGTAGAGCCAACCATCAGGCCAAGGTAG 2850 0.4407 MHLSKVWKHEAVFSLWFCCWLLLATAQNSVTDPAEVDALKTIKGRLIDPNGNLNSWNSGDPCRSRWRGVHCNSTVADNHLHVKELRLLNLNLFGNLAPEIGNLSYLEILDFMWNHISGSIPKEIGNIKSLQLLLLNGNSLIGRLPEELGYLPNLNRMQIDQNYITGPIPTSFANLNKIQHFHMSNNLFTGQIPREFSRLSSLIHLLLDHNKLSGDLPHELSRIPNIRIIQLDNNDFGGSAIPDSYGNIDKLLKLTLGNCNLQGPIPDFSGIRGLLYLNLSSNQLNESIPSSKLSDKVTTIDLSNNKLTGTIPSYFSGLPRLQLLSLSNNSLNGSVPSAIWQNRTSNGMHELRLDFQNNNLSSISGAIDLPANVTLRLDGNPLCSNNTLAQLCASANDTNSLSLTDSSVDCPPQACPPPFEYSKKCFCAAPLLIGYRLRSPGFCDFNPYQTEFENFLASNYSLMNHQVDIGTPEWQALRLQMYLKLFPDSTDGKSSQTFNESEVFRLYSMFAGWVIPDHDFFGPYELLNFTLLGPYKDMTFGPATSAGISKGALAGIILGTIAGAVTLSTIVTLLIMRARIRDYRGALSSKRQLSRTSIKIEGVRSFTFEEMASATNNFSDSSQAGQGGYGKVYRGILTDGTAVAIKRARVGSLQGEREFLTEIQLLSRLHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSAYSKEPLSFGMRLRIALGSAKGILYLHTEADPPVFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREITVAYQSGEVFSVMDRRMGPYPSEHLEKFLTLALKCSQDEPDARPKMAEVVRELENLWSMMPESNAKIPEYISSDSGKLFSSRSSSCVSKTPFISGDTSGTGSELVSGVEPTIRPR 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4981g00026 949 Gene3D Phosphorylase Kinase; domain 1 582 693 - -
Pral4981g00026 949 SUPERFAMILY L domain-like 44 405 - -
Pral4981g00026 949 Gene3D Ribonuclease Inhibitor 193 291 IPR032675 -
Pral4981g00026 949 Gene3D Ribonuclease Inhibitor 292 415 IPR032675 -
Pral4981g00026 949 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Pral4981g00026 949 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 193 - -
Pral4981g00026 949 MobiDBLite consensus disorder prediction 909 949 - -
Pral4981g00026 949 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Pral4981g00026 949 SMART serkin_6 618 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4981g00026 949 SUPERFAMILY Protein kinase-like (PK-like) 603 911 IPR011009 -
Pral4981g00026 949 PRINTS Leucine-rich repeat signature 318 331 - -
Pral4981g00026 949 PRINTS Leucine-rich repeat signature 297 310 - -
Pral4981g00026 949 MobiDBLite consensus disorder prediction 909 939 - -
Pral4981g00026 949 Gene3D Transferase(Phosphotransferase) domain 1 694 906 - -
Pral4981g00026 949 PANTHER RECEPTOR-LIKE PROTEIN 55 44 893 - -
Pral4981g00026 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Pral4981g00026 949 Pfam Leucine rich repeat 296 341 IPR001611 GO:0005515
Pral4981g00026 949 CDD STKc_IRAK 625 890 - -
Pral4981g00026 949 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 694 903 - -
Pral4981g00026 949 FunFam Leucine-rich repeat protein kinase family protein 584 693 - -
Pral4981g00026 949 Pfam Protein tyrosine and serine/threonine kinase 623 887 IPR001245 GO:0004672|GO:0006468
Pral4981g00026 949 ProSiteProfiles Protein kinase domain profile. 618 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4981g00026 Pral-Chr4981 117754 128387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4981g00026 18 901 Receptor kinase-like Gene Family AT5G01950 58.129 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral4981g00026 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4981g00026 - - pcin:129318464 1486.86