Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4979g00019 ATGTCCAAGGCAGGTGAAGTTGTTCTTCTGGACTTCTGGGCAAGTCCATTCTGCCTGAGAGCAAGAGTTGCTCTGGAAGAAAAGGGTGTGGCGTACGAGAGCAGGGAAGAGAACCTGCTTGGAGGAAAAAGTGATCTTTTGCTCAGCTCTAATCCCATTCACAGGAAAGTCCCTGTGTTACTGCACAATGGCCTGCCTGTGCTGGAGTCTTCAAACATTGTTGCTTATGTTGATGAGGCCTGGCCTTCCAAACCTCTGCTTCCGACCAACCCATACGAGCGTGCACAAGCTCGTTTTTGGGCTGACTATATTGACAAAACGGTATTTGAGACTGGAAAGGGAATTTGGTTAAGCAAGGGAGCAGAAGAGCGAGAAGCGGCCGTGAAGAACTTAATTGAAGTAGTCAAGAATTTGGAGGGAGCTCTAGGCGACAAAGATTTCTTTGGTGGTGACGCCTTTGGGTATGTGGACATCATAGCAATGGGCCCGGCCTCATGGTTTTATGCTTACGAGGAAATTGGGGGATTCAAACTGGAAGACCACTGTCCCAAATTCTCATCTTGGATGCAGAGATGCTTGCAAAGGCCCTCTATTGCCAAAACCTATCCGGACCCAGAAAAAGTTCACCAGCTTGTTGTCAAATTATCCGAGATCATGGGGTAA 663 0.4796 MSKAGEVVLLDFWASPFCLRARVALEEKGVAYESREENLLGGKSDLLLSSNPIHRKVPVLLHNGLPVLESSNIVAYVDEAWPSKPLLPTNPYERAQARFWADYIDKTVFETGKGIWLSKGAEEREAAVKNLIEVVKNLEGALGDKDFFGGDAFGYVDIIAMGPASWFYAYEEIGGFKLEDHCPKFSSWMQRCLQRPSIAKTYPDPEKVHQLVVKLSEIMG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4979g00019 220 Coils Coil 121 141 - -
Pral4979g00019 220 Pfam Glutathione S-transferase, N-terminal domain 9 83 IPR004045 -
Pral4979g00019 220 FunFam Tau class glutathione S-transferase 1 89 - -
Pral4979g00019 220 Gene3D - 90 220 - -
Pral4979g00019 220 CDD GST_N_Tau 7 81 - -
Pral4979g00019 220 Gene3D Glutaredoxin 1 89 - -
Pral4979g00019 220 SFLD Main.3: Omega- and Tau-like 4 216 IPR045073 -
Pral4979g00019 220 SFLD Glutathione Transferase (cytosolic) 4 216 IPR040079 -
Pral4979g00019 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Pral4979g00019 220 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Pral4979g00019 220 Pfam Glutathione S-transferase, C-terminal domain 118 196 IPR004046 -
Pral4979g00019 220 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Pral4979g00019 220 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Pral4979g00019 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 209 IPR045073 -
Pral4979g00019 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4979g00019 Pral-Chr4979 82625 83389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4979g00019 4 220 Glutathione S-transferase Gene Family AT1G17180 53.670 1.45e-82 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4979g00019 K00799 - mnt:21384955 305.064