Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4979g00014 ATGGTTCTGTCGAAGACAGCTTCTGAGACGGACGCCTCCGTCCACTCGACGTTCGCGTCGCGATACGTGAGAGCGGCGTTGCCAAGGTTCAAGATGGCGGAGCATTCGATCCCCAAGGAGGCGGCGTACCAGATCATCAACGACGAGCTCATGCTGGACGGTAATCCCAGGCTCAACCTCGCCTCCTTCGTCACCACCTGGATGGAGCCTGAGTGCGACAAGCTCATCATGTCCGCCATCAACAAGAATTACGTCGACATGGATGAGTATCCAGTCACCACCGAGCTCCAGAATCGGTGTGTGAACATGATAGCCCATCTTTTCAATGCACCGCTTCAAGATTCAGAAACTGCGGTGGGTGTTGGCACAGTTGGCTCATCGGAGGCCATCATGTTGGCTGGCTTGGCTTTCAAAAGAAAGTGGCAGAACAGAAGAAAAGCAGAGGGCAAGCCAATCGACAAACCCAATATTGTCACTGGTGCTAATGTTCAGGTTTGCTGGGAGAAATTCGCGAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAGCTGAGGGAAGATTACTTCGTAATGGATCCTGAGAAGGCAGTGGAAATGGTGGATGAGAACACCATCTGTGTTGCTGCTATCCTTGGTTCCACCCTCAATGGAGAATTCGAAGATGTCAAACGCTTAAATGATCTCCTCATTGAGAAGAATAACGAAACTGGATGGGATACCCCAATTCATGTGGATGCAGCGAGTGGTGGCTTCATCGCACCATTTATATATCCAGACCTTGAATGGGACTTTCGCTTGCCACTTGTGAAGAGCATCAACGTTAGTGGACACAAATATGGACTTGTGTACGCAGGAATCGGCTGGGTCATTTGGAGAAGTAAGGAAGATTTGCCTGAAGAACTCATCTTTCACATCAACTACCTCGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGGTCTAGTCAAGTCATTGCTCAGTACTACCAGCTCATCCGCCTGGGCTATGAGGGATATAGGAATGTGATGGAAAATTGCAGAGACAATATGATAGTGTTGAAAGAGGGGTTGGAGAAAACAGGGCGCTTTAACATCATATCAAAAGATGATGGAGTGCCGTTGGTGGCCTTCACCTTGAAGGATCGCAGCCACTTCACGGAATTCCAGATATCTGATTTCTTGAAGCGTTATGGGTGGATCGTGCCGGCTTACACTATGCCTCCAGATGCTCAGAACGTCACCGTCCTCCGCGTCGTCATCAGAGAGGACTTCTCCCGAACCTTCGCCGAGCGTCTCGTCATTGATATCCAGAAAGTCTTGCACGAGCTCGATTTGCTACCTGGCCGGGTCATCGAGAGCACCACCGTCAACGTCACGGCGGAGATGGCAGAAAACGGCAATATCGTCCCCAGAAAGAGTGAAATCGAAACCCAAAGGGAAATCACTACGGCCTGGAGGAAGTTCGTGTCCGACAGGAAGAAGATGAACGAGAAGATGAACGGCGTTTGTTAA 1515 0.501 MVLSKTASETDASVHSTFASRYVRAALPRFKMAEHSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLQDSETAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLREDYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNNETGWDTPIHVDAASGGFIAPFIYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLEKTGRFNIISKDDGVPLVAFTLKDRSHFTEFQISDFLKRYGWIVPAYTMPPDAQNVTVLRVVIREDFSRTFAERLVIDIQKVLHELDLLPGRVIESTTVNVTAEMAENGNIVPRKSEIETQREITTAWRKFVSDRKKMNEKMNGVC 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4979g00014 504 Gene3D - 1 65 - -
Pral4979g00014 504 Gene3D - 361 448 - -
Pral4979g00014 504 Gene3D - 66 360 IPR015421 GO:0003824
Pral4979g00014 504 CDD DOPA_deC_like 59 439 - -
Pral4979g00014 504 FunFam Glutamate decarboxylase 1 65 - -
Pral4979g00014 504 FunFam Glutamate decarboxylase 361 448 - -
Pral4979g00014 504 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral4979g00014 504 FunFam Glutamate decarboxylase 66 360 - -
Pral4979g00014 504 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pral4979g00014 504 SUPERFAMILY PLP-dependent transferases 14 444 IPR015424 -
Pral4979g00014 504 PANTHER GLUTAMATE DECARBOXYLASE 1 495 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4979g00014 Pral-Chr4979 42117 44877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4979g00014 1 504 Calmodulin-binding Proteins AT5G17330 83.202 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4979g00014 K01580 - gmx:100796533 913.294