Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4978g00010 ATGGGAGCATCAGGATTGGATAATCCGATGTGGGTTTTAAACGGGTCGTCTCCTGCTAATTTCAAATCTCATCATCATCAGTTGCACTATGGGGTCGGGGTCGGGGCTTCTCATCATCGCAATGAGGAGGCCACATCCTCATCGGGGTTCATGAGATCCAGGTTTATGATGCCTAAACTACCCTCCAGGAGAAGCATGAGAGCTCCTAGAATGCGTTGGACTACAACCCTCCATGCCAGATTCGTTCACGCCGTTCAGCTTCTTGGCGGCCATGAAAGAGCCACTCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCATTTGCAGATGTATCGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCCTCAGGCCAATCAGATGGATCTGGTGAGGATGACATGTCCCCCGTCGGTGGCAACGCCGATCGTGGTGGTCTTCGCCAGTTTTCCAATCCAAGAGGCCGATCAGCAGATCGATCTCTGCAACAAGACGTAGACCATCCTTCTACTACTCTATGGAGTAATTCTTCAAGAGAGCCATGGCCGCCACAGAATAATCCTTATGATATGGATGGTCTCAGAAAAACTGCCTTCCACTCACAACCGATGTCAAGAGGGCATCAAACTCAGGAATGTAATTCAAGGGAAGCACGAGTGCTAGTGAAGAACAGTTTGTCAGATGTCAATAGAGAATGCAAGAATCCATGCTTGGAGTTTACGTTAGGAAGACCAGATTGGAATGGTGGCAGAGGACAGGCCTAG 792 0.4874 MGASGLDNPMWVLNGSSPANFKSHHHQLHYGVGVGASHHRNEEATSSSGFMRSRFMMPKLPSRRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDMSPVGGNADRGGLRQFSNPRGRSADRSLQQDVDHPSTTLWSNSSREPWPPQNNPYDMDGLRKTAFHSQPMSRGHQTQECNSREARVLVKNSLSDVNRECKNPCLEFTLGRPDWNGGRGQA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4978g00010 263 FunFam Myb family transcription factor 67 125 - -
Pral4978g00010 263 Pfam Myb-like DNA-binding domain 70 121 IPR001005 -
Pral4978g00010 263 NCBIfam myb-like DNA-binding domain, SHAQKYF class 69 122 IPR006447 GO:0003677
Pral4978g00010 263 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 24 258 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral4978g00010 263 MobiDBLite consensus disorder prediction 163 193 - -
Pral4978g00010 263 Gene3D - 68 125 - -
Pral4978g00010 263 MobiDBLite consensus disorder prediction 122 140 - -
Pral4978g00010 263 MobiDBLite consensus disorder prediction 122 204 - -
Pral4978g00010 263 SUPERFAMILY Homeodomain-like 66 122 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4978g00010 Pral-Chr4978 58580 62229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4978g00010 49 256 G2-like Transcription Factor Family AT5G16560 58.605 3.16e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4978g00010 Myb_DNA-binding 8.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4978g00010 - - gmx:100815360 303.523