Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4978g00003 ATGTACAAGAATGAACTTAACAAATACTGTATGACCTGCAACAAATCTGCTTGCCAATATTGTGTGTCTTTTGGTATTCATCGATGCCACAAAATGCTTAGCATTTATAAACATGTTTACAAATATGTTGTTGCCATGGCTGCTGTTGAAAAGCATATTGACTGTTCACAGATTCAGACCTACAAATGCAACAAACGATTGGTTATTGCTCTGAATCCTCTTCCACATGGCGGTTTGGCAACAGATACTGGGCTATTATGTGAGATCTGTGGTAGGAGGGTGACTCACCCTCATCTGTATCGTTACTGCTCCATTTCATGCAAGGTTCAAGCTGTTTTAAGGAAGCCCAATGAATCACTCCCTCCCTTCATTACCATCCAGCGTCCTTCTAAGGGAAAGAAAGAGAAAGCCTCTGAGCCCCAGAAGCCTATAAACAAAAGAAAGGGAACACCCCGTAGGGCTCCCTTCTTCTAA 474 0.4219 MYKNELNKYCMTCNKSACQYCVSFGIHRCHKMLSIYKHVYKYVVAMAAVEKHIDCSQIQTYKCNKRLVIALNPLPHGGLATDTGLLCEICGRRVTHPHLYRYCSISCKVQAVLRKPNESLPPFITIQRPSKGKKEKASEPQKPINKRKGTPRRAPFF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4978g00003 157 MobiDBLite consensus disorder prediction 129 146 - -
Pral4978g00003 157 Pfam PLATZ transcription factor 37 109 IPR006734 -
Pral4978g00003 157 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 155 - -
Pral4978g00003 157 CDD Bbox2 3 35 - -
Pral4978g00003 157 MobiDBLite consensus disorder prediction 123 157 - -
Pral4978g00003 157 SUPERFAMILY B-box zinc-binding domain 4 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4978g00003 Pral-Chr4978 29116 30905 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pral4978g00003 PLATZ 2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4978g00003 - - qsa:O6P43_014262 215.312